RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CRELD2Q6UXH1 353 aaPredicted RBP6.31□□□□□ -1.4
VRK1-203ENST00000555067 ZNF66Q6ZN08 573 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 TEX19Q8NA77 164 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
VRK1-203ENST00000555067 MTFMTQ96DP5 389 aaKnown RBP6.31□□□□□ -1.4
VRK1-203ENST00000555067 SLC35A4Q96G79 324 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 PTDSS2Q9BVG9 487 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
VRK1-203ENST00000555067 GTPBP4Q9BZE4 634 aaKnown RBP6.31□□□□□ -1.4
VRK1-203ENST00000555067 NLRC4Q9NPP4 1024 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 PLEKHM1Q9Y4G2 1056 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 H3BUI4 141 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 LIPAP38571 399 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 VIPR2P41587 438 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 SOX8P57073 446 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 SIM2Q14190 667 aaPredicted RBP6.3□□□□□ -1.4
VRK1-203ENST00000555067 PLS1Q14651 629 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 ARHGAP40Q5TG30 622 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 XRRA1Q6P2D8 792 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 B3GNT9Q6UX72 402 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 CATIPQ7Z7H3 387 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 SRLQ86TD4 932 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 ZNF354CQ86Y25 554 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 FAM186BQ8IYM0 893 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.3□□□□□ -1.4
VRK1-203ENST00000555067 RP9Q8TA86 221 aaKnown RBP6.3□□□□□ -1.4
VRK1-203ENST00000555067 MVB12AQ96EY5 273 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 NUP88Q99567 741 aaPredicted RBP6.3□□□□□ -1.4
VRK1-203ENST00000555067 GLOD4Q9HC38 313 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 SARS2Q9NP81 518 aaKnown RBP6.3□□□□□ -1.4
VRK1-203ENST00000555067 DUSP22Q9NRW4 184 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 ZNF69Q9UC07 566 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 SERTAD3Q9UJW9 196 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 GTF2A1LQ9UNN4 478 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 BTBD3Q9Y2F9 522 aa6.3□□□□□ -1.4
VRK1-203ENST00000555067 MORC2Q9Y6X9 1032 aaPredicted RBP6.3□□□□□ -1.4
VRK1-203ENST00000555067 TISP43B9A030 160 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 MYO1FO00160 1098 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 TRIM38O00635 465 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 TP73O15350 636 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 AK2P54819 239 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 LILRA4P59901 499 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 SATB1Q01826 763 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 PCID2Q5JVF3 399 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 CHST15Q7LFX5 561 aaPredicted RBP6.29□□□□□ -1.4
VRK1-203ENST00000555067 LRRC71Q8N4P6 559 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 SLC35G2Q8TBE7 412 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 ATG4AQ8WYN0 398 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 SCLT1Q96NL6 688 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 FSD1LQ9BXM9 530 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 C1orf112Q9NSG2 853 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 SSX2IPQ9Y2D8 614 aa6.29□□□□□ -1.4
VRK1-203ENST00000555067 ABHD14A-ACY1A0A1B0GW23 586 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 SMIM22K7EJ46 135 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 PPP6CO00743 305 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 AP1G1O43747 822 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 CTNND1O60716 968 aaKnown RBP6.28□□□□□ -1.4
VRK1-203ENST00000555067 UNC5CO95185 931 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 TUBB4AP04350 444 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 GRPP07492 148 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 NPSP0C0P6 89 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 SETSIPP0DME0 302 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 HSPA6P17066 643 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 KCNJ5P48544 419 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 E2F2Q14209 437 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 KRT72Q14CN4 511 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 SLC4A8Q2Y0W8 1093 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 YTHDF3Q7Z739 585 aaKnown RBP6.28□□□□□ -1.4
VRK1-203ENST00000555067 GPATCH11Q8N954 259 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 PCSK9Q8NBP7 692 aaKnown RBP6.28□□□□□ -1.4
VRK1-203ENST00000555067 MYD88Q99836 296 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 C9orf78Q9NZ63 289 aaPredicted RBP6.28□□□□□ -1.4
VRK1-203ENST00000555067 FNIP2Q9P278 1114 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 ADAMTS5Q9UNA0 930 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 SHOC2Q9UQ13 582 aa6.28□□□□□ -1.4
VRK1-203ENST00000555067 A6NNZ2 444 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 ZNF500O60304 480 aaPredicted RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 FESP07332 822 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 LDHCP07864 332 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 NHLRC4P0CG21 123 aaPredicted RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 MYBP10242 640 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 CYP2D6P10635 497 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 SLC5A1P13866 664 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 ENGP17813 658 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 RHCEP18577 417 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 HDCP19113 662 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 MPGP29372 298 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 ALDH5A1P51649 535 aaPredicted RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 PDE1AP54750 535 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 HOXA4Q00056 320 aaPredicted RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 RHDQ02161 417 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 KLF9Q13886 244 aaPredicted RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 LCE1EQ5T753 118 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 IFIT1BQ5T764 474 aaKnown RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 SLC9A4Q6AI14 798 aa6.27□□□□□ -1.41
VRK1-203ENST00000555067 RGS7BPQ6MZT1 257 aaPredicted RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 PARS2Q7L3T8 475 aaKnown RBP6.27□□□□□ -1.41
VRK1-203ENST00000555067 NEUROD6Q96NK8 337 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms