RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CASQ2O14958 399 aaPredicted RBP16.32■□□□□ 0.2
SYNE3-203ENST00000554873 NEK2P51955 445 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 STAT2P52630 851 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 TGFBIQ15582 683 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 ZNF423Q2M1K9 1284 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 ANO5Q75V66 913 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 ANKS1BQ7Z6G8 1248 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PYROXD1Q8WU10 500 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PSPC1Q8WXF1 523 aaKnown RBP16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PLVAPQ9BX97 442 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 TEKT3Q9BXF9 490 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 C1orf21Q9H246 121 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 TMEM206Q9H813 350 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 RSL24D1Q9UHA3 163 aaKnown RBP16.32■□□□□ 0.2
SYNE3-203ENST00000554873 FUOMA2VDF0 154 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 IPO5O00410 1097 aaKnown RBP16.32■□□□□ 0.2
SYNE3-203ENST00000554873 TM9SF1O15321 606 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 RXRGP48443 463 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 APOFQ13790 326 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 C16orf72Q14CZ0 275 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 POTEHQ6S545 545 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 XXYLT1Q8NBI6 393 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 ACCSQ96QU6 501 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 CGREF1Q99674 301 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 OSBPL6Q9BZF3 934 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 POLIQ9UNA4 740 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 COQ6Q9Y2Z9 468 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 S100A1P23297 94 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 MXI1P50539 228 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 INAQ16352 499 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 IZUMO3Q5VZ72 239 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 ALYREFQ86V81 257 aaKnown RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 SLC26A7Q8TE54 656 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 JADE3Q92613 823 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 SEMA4DQ92854 862 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 GCNAQ96QF7 691 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 RRN3Q9NYV6 651 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 SLC24A2Q9UI40 661 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 TRIM17Q9Y577 477 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 RBBP6Q7Z6E9 1792 aaKnown RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 GOLGA8IPA6NC78 632 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 C2orf71A6NGG8 1288 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 GOLGA8JA6NMD2 632 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 CSDE1O75534 798 aaKnown RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 KRT38O76015 456 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 KDSRQ06136 332 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 BTKQ06187 659 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 HIC1Q14526 733 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 NEPROQ6NW34 567 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 C12orf56Q8IXR9 622 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 ZCCHC9Q8N567 271 aaKnown RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 PSMC3IPQ9P2W1 217 aaPredicted RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 GTF3C4Q9UKN8 822 aa16.31■□□□□ 0.2
SYNE3-203ENST00000554873 GPC6Q9Y625 555 aaPredicted RBP16.31■□□□□ 0.2
SYNE3-203ENST00000554873 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 A0A088AWK7 358 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 ADCY6O43306 1168 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 ENTPD1P49961 510 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 PDAP1Q13442 181 aaKnown RBP16.3■□□□□ 0.2
SYNE3-203ENST00000554873 GRAMD1BQ3KR37 738 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 PODNQ7Z5L7 613 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 ACER1Q8TDN7 264 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 TMEM174Q8WUU8 243 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 ATG4AQ8WYN0 398 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 SHC3Q92529 594 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 TDRD3Q9H7E2 651 aaKnown RBP16.3■□□□□ 0.2
SYNE3-203ENST00000554873 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 DOLKQ9UPQ8 538 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 DTNAQ9Y4J8 743 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 NDUFB5O43674 189 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
SYNE3-203ENST00000554873 OXSR1O95747 527 aaPredicted RBP16.3■□□□□ 0.2
SYNE3-203ENST00000554873 CYP11B1P15538 503 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 STIP1P31948 543 aaKnown RBP16.3■□□□□ 0.2
SYNE3-203ENST00000554873 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 CENPUQ71F23 418 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 CCDC89Q8N998 374 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 TBC1D23Q9NUY8 699 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 PADI4Q9UM07 663 aa16.3■□□□□ 0.2
SYNE3-203ENST00000554873 SPTLC1O15269 473 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 ITM2AO43736 263 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 ADRB2P07550 413 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 PHKA2P46019 1235 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 STT3AP46977 705 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 CDK9P50750 372 aaKnown RBP16.29■□□□□ 0.2
SYNE3-203ENST00000554873 BCAP31P51572 246 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 PRKD1Q15139 912 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-203ENST00000554873 HEPHQ9BQS7 1158 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 DNAJA2O60884 412 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 IL1BP01584 269 aa16.29■□□□□ 0.2
SYNE3-203ENST00000554873 PPARGP37231 505 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms