RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 UXTQ9UBK9 157 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-214ENST00000554604 ZMYM5Q9UJ78 669 aa13.22□□□□□ -0.29
SHMT2-214ENST00000554604 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
SHMT2-214ENST00000554604 MRPS17Q9Y2R5 130 aaKnown RBP13.22□□□□□ -0.29
SHMT2-214ENST00000554604 LUC7L2Q9Y383 392 aaKnown RBP13.22□□□□□ -0.29
SHMT2-214ENST00000554604 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 FAM170BA6NMN3 283 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 LRRIQ3A6PVS8 624 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-214ENST00000554604 RNF225M0QZC1 329 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-214ENST00000554604 NCAM2O15394 837 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 TACC1O75410 805 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 ZBED6P86452 979 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 CYP27A1Q02318 531 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 NCOA4Q13772 614 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 ANGPT1Q15389 498 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 CCDC142Q17RM4 750 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 ZNF699Q32M78 642 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
SHMT2-214ENST00000554604 FAM171BQ6P995 826 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 TOGARAM2Q6ZUX3 1019 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 STKLD1Q8NE28 680 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 MRPS31Q92665 395 aaKnown RBP13.21□□□□□ -0.29
SHMT2-214ENST00000554604 MRPL45Q9BRJ2 306 aaKnown RBP13.21□□□□□ -0.29
SHMT2-214ENST00000554604 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
SHMT2-214ENST00000554604 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 EDEM3Q9BZQ6 932 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 IL21Q9HBE4 155 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.29
SHMT2-214ENST00000554604 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 MAN2B1O00754 1011 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
SHMT2-214ENST00000554604 LRRN2O75325 713 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 STAU1O95793 577 aaKnown RBP13.2□□□□□ -0.3
SHMT2-214ENST00000554604 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 HMGA1P17096 107 aaKnown RBP13.2□□□□□ -0.3
SHMT2-214ENST00000554604 BDNFP23560 247 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 NR2F2P24468 414 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 DDX6P26196 483 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHMT2-214ENST00000554604 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
SHMT2-214ENST00000554604 ANXA13P27216 316 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 AVPR1AP37288 418 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 GRIK1P39086 918 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 MAGEA11P43364 429 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 CLDN10P78369 228 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 NFIL3Q16649 462 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
SHMT2-214ENST00000554604 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 MDH1BQ5I0G3 518 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 VSTM1Q6UX27 236 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 MAB21L3Q8N8X9 362 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 MYLPFQ96A32 169 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 RSPRY1Q96DX4 576 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 OSBPL6Q9BZF3 934 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 XYLT2Q9H1B5 865 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 TRPV5Q9NQA5 729 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 SIK3Q9Y2K2 1263 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 PIAS3Q9Y6X2 628 aa13.2□□□□□ -0.3
SHMT2-214ENST00000554604 COL4A2P08572 1712 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 NCANO14594 1321 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 ATG2BQ96BY7 2078 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 FANCMQ8IYD8 2048 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 SLC38A8A6NNN8 435 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 A8MXQ7 604 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 CETN3O15182 167 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 CHADO15335 359 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 F11P03951 625 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 C4BPAP04003 597 aaKnown RBP13.19□□□□□ -0.3
SHMT2-214ENST00000554604 KRT13P13646 458 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 P4HA1P13674 534 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 PTPN1P18031 435 aaKnown RBP13.19□□□□□ -0.3
SHMT2-214ENST00000554604 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
SHMT2-214ENST00000554604 KPNA1P52294 538 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-214ENST00000554604 DLG4P78352 724 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 CDK17Q00537 523 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 FCHO2Q0JRZ9 810 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 MTF1Q14872 753 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 MEA1Q16626 185 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 SGSM1Q2NKQ1 1148 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 CCDC40Q4G0X9 1142 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 TXNDC8Q6A555 127 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 C1orf210Q8IVY1 113 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 CMTM8Q8IZV2 173 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 CELF5Q8N6W0 485 aaKnown RBP13.19□□□□□ -0.3
SHMT2-214ENST00000554604 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-214ENST00000554604 MYCBPAPQ8TBZ2 947 aa13.19□□□□□ -0.3
SHMT2-214ENST00000554604 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms