RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 STX6O43752 255 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 LMO2P25791 158 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 NOVA1P51513 510 aaKnown RBP10.55□□□□□ -0.72
ACTN1-210ENST00000553779 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 FAM26FQ5R3K3 315 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 BTBD8Q5XKL5 378 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 PSAPL1Q6NUJ1 521 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 FAM171BQ6P995 826 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 SCARA5Q6ZMJ2 495 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 TRAPPC11Q7Z392 1133 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 IQUBQ8NA54 791 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 PDZD8Q8NEN9 1154 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 MYCBPAPQ8TBZ2 947 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 KBTBD7Q8WVZ9 684 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 FBXO32Q969P5 355 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 PCED1BQ96HM7 432 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 ZC3H10Q96K80 434 aaKnown RBP10.55□□□□□ -0.72
ACTN1-210ENST00000553779 CEP295NLQ96MC4 621 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 PKMYT1Q99640 499 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 CGRRF1Q99675 332 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 DUSP15Q9H1R2 295 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-210ENST00000553779 POLMQ9NP87 494 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-210ENST00000553779 CRTAC1Q9NQ79 661 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 CFAP97Q9P2B7 532 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 SH3BP1Q9Y3L3 701 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 A0A087X0B3 334 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 ZBTB24O43167 697 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 EXOC3O60645 756 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 RTN3O95197 1032 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 KLF8O95600 359 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 CYP17A1P05093 508 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 ADH5P11766 374 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 TIE1P35590 1138 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 USP46P62068 366 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 CYP24A1Q07973 514 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 UAP1L1Q3KQV9 507 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 N4BP2L1Q5TBK1 243 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 FOXD4L5Q5VV16 416 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 XXYLT1Q8NBI6 393 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 USP33Q8TEY7 942 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 HMGB4Q8WW32 186 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 SYAP1Q96A49 352 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 PNKPQ96T60 521 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 MRPL45Q9BRJ2 306 aaKnown RBP10.54□□□□□ -0.72
ACTN1-210ENST00000553779 TRIM9Q9C026 710 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 LINC00597Q9H2U6 94 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 ARHGEF4Q9NR80 690 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 FAM13BQ9NYF5 915 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 EBF1Q9UH73 591 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 MMP17Q9ULZ9 603 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 CFAP47Q6ZTR5 3102 aa10.54□□□□□ -0.72
ACTN1-210ENST00000553779 BCLAF3A2AJT9 711 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 C4orf47A7E2U8 309 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 IRF1P10914 325 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 P4HA1P13674 534 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 TCF3P15923 654 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 YWHAQP27348 245 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ME1P48163 572 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 NOP14P78316 857 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 TAF10Q12962 218 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 DHCR24Q15392 516 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ANO4Q32M45 955 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 PREPLQ4J6C6 727 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ZNF667Q5HYK9 610 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 EOGTQ5NDL2 527 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 PLA2G2CQ5R387 149 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ARMCX6Q7L4S7 300 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 LPCAT2Q7L5N7 544 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 CEP57L1Q8IYX8 460 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 B3GALNT2Q8NCR0 500 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 CXorf38Q8TB03 319 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 PIGKQ92643 395 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 CNOT6LQ96LI5 555 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 C8orf48Q96LL4 319 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 MAGEF1Q9HAY2 307 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 TBC1D14Q9P2M4 693 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 TFIP11Q9UBB9 837 aaKnown RBP10.53□□□□□ -0.72
ACTN1-210ENST00000553779 MTMR6Q9Y217 621 aa10.53□□□□□ -0.72
ACTN1-210ENST00000553779 TCRBV21S2A2A0A5A6 115 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms