RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OBP2AQ9NY56 170 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 TAB2Q9NYJ8 693 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 APEX2Q9UBZ4 518 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 KIAA1257Q9ULG3 409 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 CA14Q9ULX7 337 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 ZNF263O14978 683 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 BEST1O76090 585 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 PRAMEF12O95522 483 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 USP17L7P0C7H9 530 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 SLC9A1P19634 815 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 ACO1P21399 889 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 GDI1P31150 447 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 BCAT1P54687 386 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 GOLGA7BQ2TAP0 167 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 ANO6Q4KMQ2 910 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 PHLDB3Q6NSJ2 640 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 HFE2Q6ZVN8 426 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 MFSD6LQ8IWD5 586 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 SIX5Q8N196 739 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 SCAMP5Q8TAC9 235 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 OVCA2Q8WZ82 227 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 IRF7Q92985 503 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 SMG9Q9H0W8 520 aaKnown RBP19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 ARHGEF3Q9NR81 526 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 FANCLQ9NW38 375 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 TSPAN16Q9UKR8 245 aa19.53■□□□□ 0.72
PRPF40B-216ENST00000552301 ZNF840PA6NDX5 716 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 TNFRSF10BO14763 440 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 PFKLP17858 780 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 CDK11BP21127 795 aaKnown RBP19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 PON1P27169 355 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 SKOR2Q2VWA4 1001 aaPredicted RBP19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 MIIPQ5JXC2 388 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 CDKAL1Q5VV42 579 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 BMP8AQ7Z5Y6 402 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 AOPEPQ8N6M6 819 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 ANKRD52Q8NB46 1076 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 TTC16Q8NEE8 873 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 BPIFB1Q8TDL5 484 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 KREMEN1Q96MU8 473 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 TDP1Q9NUW8 608 aa19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 THG1LQ9NWX6 298 aaKnown RBP19.52■□□□□ 0.72
PRPF40B-216ENST00000552301 NCANO14594 1321 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 C2orf78A6NCI8 922 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 STK25O00506 426 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 HDCP19113 662 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 USP8P40818 1118 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 KRT31Q15323 416 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 STILQ15468 1287 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 ARHGAP44Q17R89 818 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 ARHGAP29Q52LW3 1261 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 FKBP15Q5T1M5 1219 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 FBXL6Q8N531 539 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 ARL14EPQ8N8R7 260 aaPredicted RBP19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 FLCNQ8NFG4 579 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 DNASE1L2Q92874 299 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 USP13Q92995 863 aaPredicted RBP19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 RSPRY1Q96DX4 576 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 SHDQ96IW2 340 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 GMIPQ9P107 970 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 ANAPC1Q9H1A4 1944 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 PATJQ8NI35 1801 aa19.51■□□□□ 0.71
PRPF40B-216ENST00000552301 MYO16Q9Y6X6 1858 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 SYCE3A1L190 88 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 O00370 1275 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 BRD2P25440 801 aaKnown RBP19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 PLCB2Q00722 1185 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 FCHO2Q0JRZ9 810 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 BST2Q10589 180 aaKnown RBP19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 ZNF268Q14587 947 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 MLF2Q15773 248 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 CC2D1AQ6P1N0 951 aaPredicted RBP19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 GJB7Q6PEY0 223 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 GPRIN1Q7Z2K8 1008 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 CSGALNACT1Q8TDX6 532 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 NACA2Q9H009 215 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 VPS16Q9H269 839 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 TLR8Q9NR97 1041 aaKnown RBP19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 IL37Q9NZH6 218 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 ZDBF2Q9HCK1 2354 aa19.5■□□□□ 0.71
PRPF40B-216ENST00000552301 SMTNL1A8MU46 457 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 HHLA1C9JL84 531 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 CHADO15335 359 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 PDGFBP01127 241 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 SETSIPP0DME0 302 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 ZNF132P52740 706 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 HECTD3Q5T447 861 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 PIGZQ86VD9 579 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 TTC30AQ86WT1 665 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 SLC22A12Q96S37 553 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 CYP2S1Q96SQ9 504 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 LSM14BQ9BX40 385 aaKnown RBP19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 LRRC4Q9HBW1 653 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 CHORDC1Q9UHD1 332 aaPredicted RBP19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 SCML2Q9UQR0 700 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 CCL26Q9Y258 94 aa19.49■□□□□ 0.71
PRPF40B-216ENST00000552301 FAM92AA1XBS5 289 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 BECN2A8MW95 431 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 M0QYV0 167 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 RNF225M0QZC1 329 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms