RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 H7C4K7 107 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PAPSS1O43252 624 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PHF2O75151 1096 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 BAIAP3O94812 1187 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 DDHD2O94830 711 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 TIMP1P01033 207 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 AMHP03971 560 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 RHOXF2BP0C7M4 288 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PDGFRAP16234 1089 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 BRCC3P46736 316 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 CCL23P55773 120 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF252P-AS1Q0IIN9 211 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
CACNB3-217ENST00000550483 CYP1B1Q16678 543 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 BOLA3Q53S33 107 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 CLEC20AQ6ZU45 233 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PHLDB2Q86SQ0 1253 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 IFT20Q8IY31 132 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 TMEM199Q8N511 208 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-217ENST00000550483 TEKT4Q8WW24 435 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 IRGQQ8WZA9 623 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PCED1BQ96HM7 432 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 SCLYQ96I15 445 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PPP1R12CQ9BZL4 782 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 TRIM7Q9C029 511 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 RAB17Q9H0T7 212 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-217ENST00000550483 KRT82Q9NSB4 513 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 ADAM28Q9UKQ2 775 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 FAN1Q9Y2M0 1017 aa13.19□□□□□ -0.3
CACNB3-217ENST00000550483 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 LRCH4O75427 683 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 DAB1O75553 588 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 AP1G2O75843 785 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 TJP3O95049 919 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 PYGMP11217 842 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 IBSPP21815 317 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 TKTP29401 623 aaKnown RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 CYP2C18P33260 490 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 RGS7P49802 495 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 OGDHQ02218 1023 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 LMNB2Q03252 620 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 PTPROQ16827 1216 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 LLGL2Q6P1M3 1020 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 SYDE1Q6ZW31 735 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 PSTKQ8IV42 348 aaKnown RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 CCDC50Q8IVM0 306 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 MAP7D3Q8IWC1 876 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 JOSD2Q8TAC2 188 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
CACNB3-217ENST00000550483 RXFP2Q8WXD0 754 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 KRT12Q99456 494 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 PKMYT1Q99640 499 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 FAM129AQ9BZQ8 928 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
CACNB3-217ENST00000550483 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 F8VP50 259 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 NDC80O14777 642 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 NRP1O14786 923 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 PRPSAP2O60256 369 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 KRT1P04264 644 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 FGFR3P22607 806 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 MATKP42679 507 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 MARCKSL1P49006 195 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 AIF1P55008 147 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 SLC25A11Q02978 314 aaKnown RBP13.17□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-217ENST00000550483 CUL1Q13616 776 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 NAA30Q147X3 362 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-217ENST00000550483 PDK2Q15119 407 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 FBXO38Q6PIJ6 1188 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-217ENST00000550483 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 TSC1Q92574 1164 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms