RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 HDCP19113 662 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 DDX6P26196 483 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC7-229ENST00000549883 YWHAQP27348 245 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 SLC5A3P53794 718 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 ZNF77Q15935 545 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CCDC40Q4G0X9 1142 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 ARHGAP29Q52LW3 1261 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 PPP1R26Q5T8A7 1209 aaPredicted RBP10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CLEC20AQ6ZU45 233 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 ALYREFQ86V81 257 aaKnown RBP10.37□□□□□ -0.75
HDAC7-229ENST00000549883 NUP93Q8N1F7 819 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 UBR7Q8N806 425 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 SLC4A11Q8NBS3 891 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CSGALNACT1Q8TDX6 532 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 SH3RF2Q8TEC5 729 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 FAM3CQ92520 227 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 ATOH1Q92858 354 aaPredicted RBP10.37□□□□□ -0.75
HDAC7-229ENST00000549883 WBP2Q969T9 261 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 E2F7Q96AV8 911 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 SMARCD1Q96GM5 515 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 HNRNPABQ99729 332 aaKnown RBP10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CSNK1G1Q9HCP0 422 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 DMAP1Q9NPF5 467 aaPredicted RBP10.37□□□□□ -0.75
HDAC7-229ENST00000549883 TRPV5Q9NQA5 729 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 CISHQ9NSE2 258 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 SMPD4Q9NXE4 827 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 IL37Q9NZH6 218 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 GMIPQ9P107 970 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 WNT6Q9Y6F9 365 aa10.37□□□□□ -0.75
HDAC7-229ENST00000549883 BICDL2A1A5D9 508 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 ANTXRLA6NF34 631 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 SPECC1L-ADORA2AF8WAN1 911 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 RNF225M0QZC1 329 aaPredicted RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 TULP2O00295 520 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 STX10O60499 249 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 OAS1P00973 400 aaKnown RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 USP17L7P0C7H9 530 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 CTHP32929 405 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 USP4Q13107 963 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 GAS6Q14393 721 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 ZNF268Q14587 947 aaPredicted RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 PON2Q15165 354 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 DPCR1Q3MIW9 517 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 TSSK4Q6SA08 328 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 ZNF852Q6ZMS4 543 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 Q6ZS52 159 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 IRF2BP1Q8IU81 584 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 ARHGEF19Q8IW93 802 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 TRIM59Q8IWR1 403 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 GPT2Q8TD30 523 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 FBXO32Q969P5 355 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 CLDN23Q96B33 292 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 HEXIM2Q96MH2 286 aaKnown RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 GTPBP4Q9BZE4 634 aaKnown RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 FBRSL1Q9HCM7 1045 aaKnown RBP10.36□□□□□ -0.75
HDAC7-229ENST00000549883 C2orf42Q9NWW7 574 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 OSER1Q9NX31 292 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
HDAC7-229ENST00000549883 ATP8B3O60423 1300 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 KIAA1549LQ6ZVL6 1849 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 CYP26A1O43174 497 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 COCHO43405 550 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 OLFM2O95897 454 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 TBX18O95935 607 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 FAM200BP0CF97 657 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 CHRNB1P11230 501 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 HOXD11P31277 338 aaPredicted RBP10.35□□□□□ -0.75
HDAC7-229ENST00000549883 PPP1R2P41236 205 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 MRE11P49959 708 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 NUBP1P53384 320 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 APBA1Q02410 837 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 KCNH2Q12809 1159 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 MTAPQ13126 283 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 CUL2Q13617 745 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 RUNX3Q13761 415 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 MTF1Q14872 753 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 ITPRIPL2Q3MIP1 535 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 FOXR2Q6PJQ5 311 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 RRAGAQ7L523 313 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 C1orf210Q8IVY1 113 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 TRIML1Q8N9V2 468 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 CCDC150Q8NCX0 1101 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 TFAP2BQ92481 460 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 TMEM176AQ96HP8 235 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 ZFRQ96KR1 1074 aaKnown RBP10.35□□□□□ -0.75
HDAC7-229ENST00000549883 CEP295NLQ96MC4 621 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 PRRX2Q99811 253 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 ZSWIM1Q9BR11 485 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 OSBPL6Q9BZF3 934 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 LMAN1LQ9HAT1 526 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 NMUR1Q9HB89 426 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 METTL14Q9HCE5 456 aaKnown RBP10.35□□□□□ -0.75
HDAC7-229ENST00000549883 POLR3BQ9NW08 1133 aaPredicted RBP10.35□□□□□ -0.75
HDAC7-229ENST00000549883 SPATA6Q9NWH7 488 aaPredicted RBP10.35□□□□□ -0.75
HDAC7-229ENST00000549883 THG1LQ9NWX6 298 aaKnown RBP10.35□□□□□ -0.75
HDAC7-229ENST00000549883 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms