RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 LRGUKQ96M69 825 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 PUS7Q96PZ0 661 aaKnown RBP5.21□□□□□ -1.58
CCDC38-208ENST00000549876 DPH1Q9BZG8 443 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 CDH19Q9H159 772 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 ZMAT3Q9HA38 289 aaKnown RBP5.21□□□□□ -1.58
CCDC38-208ENST00000549876 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-208ENST00000549876 GABRQQ9UN88 632 aa5.21□□□□□ -1.58
CCDC38-208ENST00000549876 SCAF8Q9UPN6 1271 aaKnown RBP5.21□□□□□ -1.58
CCDC38-208ENST00000549876 CCDC187A0A096LP49 1063 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 CHRM5P08912 532 aaPredicted RBP5.2□□□□□ -1.58
CCDC38-208ENST00000549876 PDE6CP51160 858 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 AGFG1P52594 562 aaKnown RBP5.2□□□□□ -1.58
CCDC38-208ENST00000549876 HTRA4P83105 476 aaPredicted RBP5.2□□□□□ -1.58
CCDC38-208ENST00000549876 LY6KQ17RY6 165 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 DEPDC1Q5TB30 811 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 DAAM2Q86T65 1068 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 GAS2L3Q86XJ1 694 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 SLC15A3Q8IY34 581 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 KBTBD7Q8WVZ9 684 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 XAGE5Q8WWM1 108 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 LENG8Q96PV6 779 aaPredicted RBP5.2□□□□□ -1.58
CCDC38-208ENST00000549876 SMURF2Q9HAU4 748 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 ATP6V0A4Q9HBG4 840 aa5.2□□□□□ -1.58
CCDC38-208ENST00000549876 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 BTN3A1O00481 513 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 TUSC2O75896 110 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 KITP10721 976 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 XRCC6P12956 609 aaKnown RBP eCLIP5.19□□□□□ -1.58
CCDC38-208ENST00000549876 KCNA3P22001 575 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 IL1R2P27930 398 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 IGBP1P78318 339 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 TBC1D25Q3MII6 688 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 MEX3CQ5U5Q3 659 aaKnown RBP5.19□□□□□ -1.58
CCDC38-208ENST00000549876 LMBRD2Q68DH5 695 aaPredicted RBP5.19□□□□□ -1.58
CCDC38-208ENST00000549876 ABRAQ8N0Z2 381 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 FAM177A1Q8N128 213 aaPredicted RBP5.19□□□□□ -1.58
CCDC38-208ENST00000549876 TERB1Q8NA31 727 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 ZBTB34Q8NCN2 500 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 NSMCE1Q8WV22 266 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 SNX18Q96RF0 628 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 FAM118BQ9BPY3 351 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 FER1L4A9Z1Z3 1794 aa5.19□□□□□ -1.58
CCDC38-208ENST00000549876 LY6G6EA0A0G2JKS1 128 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 A0A1W2PPL8 197 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 TMEM233B4DJY2 109 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 MYO1CO00159 1063 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 USP1O94782 785 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 PDE8BO95263 885 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 MYBP10242 640 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 CYP1B1Q16678 543 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 MGAT5BQ3V5L5 792 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 CERKLQ49MI3 558 aaPredicted RBP5.18□□□□□ -1.58
CCDC38-208ENST00000549876 ANO6Q4KMQ2 910 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 SHC4Q6S5L8 630 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 NPNTQ6UXI9 565 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 ZNF783Q6ZMS7 281 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 MEPCEQ7L2J0 689 aaKnown RBP5.18□□□□□ -1.58
CCDC38-208ENST00000549876 OVCH2Q7RTZ1 564 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 RAVER1Q8IY67 606 aaKnown RBP5.18□□□□□ -1.58
CCDC38-208ENST00000549876 ABHD11Q8NFV4 315 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 OSCP1Q8WVF1 389 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 MAML1Q92585 1016 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 MARK4Q96L34 752 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 ZIM2Q9NZV7 527 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 SNX14Q9Y5W7 946 aa5.18□□□□□ -1.58
CCDC38-208ENST00000549876 TCRBV5S1A1TA0A578 114 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 PRR23D1E9PI22 279 aaPredicted RBP5.17□□□□□ -1.58
CCDC38-208ENST00000549876 VNN1O95497 513 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 PRR23D2P0DMB1 279 aaPredicted RBP5.17□□□□□ -1.58
CCDC38-208ENST00000549876 EPHB1P54762 984 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 TPTEP56180 551 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 GPSM2P81274 684 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 KRT17Q04695 432 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 PLA1AQ53H76 456 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 MTHFD1LQ6UB35 978 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 ZNF813Q6ZN06 617 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 IZUMO1Q8IYV9 350 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 OR6B3Q8NGW1 331 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 IL31RAQ8NI17 732 aa5.17□□□□□ -1.58
CCDC38-208ENST00000549876 MS4A7Q9GZW8 240 aaPredicted RBP5.17□□□□□ -1.58
CCDC38-208ENST00000549876 THRAP3Q9Y2W1 955 aaKnown RBP5.17□□□□□ -1.58
CCDC38-208ENST00000549876 FAM90A10PA6NDY2 464 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 UBE2Q2LH0YL09 131 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 PHGDHO43175 533 aaKnown RBP5.16□□□□□ -1.58
CCDC38-208ENST00000549876 EXOC3O60645 756 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 TMEM191BP0C7N4 346 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 PRF1P14222 555 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 RENBPP51606 427 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 SATB1Q01826 763 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 SLC13A2Q13183 592 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 TRIM71Q2Q1W2 868 aaKnown RBP5.16□□□□□ -1.58
CCDC38-208ENST00000549876 PTCHD3Q3KNS1 767 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 C10orf25Q5T742 122 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 L1TD1Q5T7N2 865 aaKnown RBP5.16□□□□□ -1.58
CCDC38-208ENST00000549876 ZDHHC24Q6UX98 284 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 MAEAQ7L5Y9 396 aa5.16□□□□□ -1.58
CCDC38-208ENST00000549876 CAND1Q86VP6 1230 aaKnown RBP5.16□□□□□ -1.58
CCDC38-208ENST00000549876 BPIFB1Q8TDL5 484 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms