RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CALCOCO1Q9P1Z2 691 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 AGO2Q9UKV8 859 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 OBSL1O75147 1896 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 DENND4CQ5VZ89 1909 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 IGHV1OR15-9A0A0B4J2B8 117 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 LAD1O00515 517 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 TRAK2O60296 914 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ABL1P00519 1130 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 PRB1P04280 392 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 SCP2P22307 547 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 PRPHP41219 470 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 PNPLA4P41247 253 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 WASP42768 502 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 NEK4P51957 841 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ANAPC15P60006 121 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 HYIQ5T013 277 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 TMEM86AQ8N2M4 240 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ZNF513Q8N8E2 541 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 NAT16Q8N8M0 369 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 SETD7Q8WTS6 366 aaKnown RBP11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ERLEC1Q96DZ1 483 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 CRELD1Q96HD1 420 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 CDK5RAP3Q96JB5 506 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ZHX3Q9H4I2 956 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 FAM124BQ9H5Z6 455 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 TRPM5Q9NZQ8 1165 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 CFAP97Q9P2B7 532 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ODF2LQ9ULJ1 636 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 CYP8B1Q9UNU6 501 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 AGAP1Q9UPQ3 857 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 CPQQ9Y646 472 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ADAMTS9Q9P2N4 1935 aa11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ZNF638Q14966 1978 aaKnown RBP11.56□□□□□ -0.56
TRAFD1-206ENST00000549358 ANK1P16157 1881 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 PTPRDP23468 1912 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ZNF840PA6NDX5 716 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ATP2C2O75185 946 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ZNF217O75362 1048 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 FAM13AO94988 1023 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ADH1CP00326 375 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ITGB3P05106 788 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 ADH5P11766 374 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 HOXB2P14652 356 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 GNSP15586 552 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 PFKLP17858 780 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 MAOBP27338 520 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 POLR2BP30876 1174 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 GRIK1P39086 918 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 USP46P62068 366 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 SLC7A9P82251 487 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 CYP4F3Q08477 520 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 SCARA3Q6AZY7 606 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 SLFN12LQ6IEE8 588 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 CRELD2Q6UXH1 353 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 TRMT11Q7Z4G4 463 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 GLRX5Q86SX6 157 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 OSTM1Q86WC4 334 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 MARCH9Q86YJ5 346 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 FUBP3Q96I24 572 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 IKZF4Q9H2S9 585 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 PARVGQ9HBI0 331 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 CACNA2D2Q9NY47 1150 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 KIAA1522Q9P206 1035 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 MAGEC2Q9UBF1 373 aaPredicted RBP11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 PCOLCE2Q9UKZ9 415 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 SNX9Q9Y5X1 595 aa11.55□□□□□ -0.56
TRAFD1-206ENST00000549358 PCDH15Q96QU1 1955 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 BPTFQ12830 3046 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 A0A1W2PQF6 199 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 TRABD2BA6NFA1 517 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 SNPHO15079 494 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 CBFA2T3O75081 653 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 NDUFS2O75306 463 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 PLCG1P19174 1290 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 BDNFP23560 247 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 MAGEA11P43364 429 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 LHX1P48742 406 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 GTF2BQ00403 316 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 GRIK2Q13002 908 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 LY6G5CQ5SRR4 150 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 SYCP2LQ5T4T6 812 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 FAM171BQ6P995 826 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 DENND5BQ6ZUT9 1274 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 TMPRSS7Q7RTY8 843 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 GPBP1Q86WP2 473 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 NT5DC4Q86YG4 428 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 CCDC83Q8IWF9 413 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 PHTF2Q8N3S3 785 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 CSGALNACT2Q8N6G5 542 aa11.54□□□□□ -0.56
TRAFD1-206ENST00000549358 KIAA1958Q8N8K9 716 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms