RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 FAM3CQ92520 227 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 ZFYVE19Q96K21 471 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 NELL2Q99435 816 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 DDX23Q9BUQ8 820 aaKnown RBP10.1□□□□□ -0.79
USP15-208ENST00000548524 OSBPL6Q9BZF3 934 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 NIF3L1Q9GZT8 377 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 KIF9Q9HAQ2 790 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
USP15-208ENST00000548524 TDP1Q9NUW8 608 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 FAM86C1Q9NVL1 165 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 ARMCX3Q9UH62 379 aaPredicted RBP10.1□□□□□ -0.79
USP15-208ENST00000548524 NDRG2Q9UN36 371 aaKnown RBP10.1□□□□□ -0.79
USP15-208ENST00000548524 PIAS3Q9Y6X2 628 aa10.1□□□□□ -0.79
USP15-208ENST00000548524 TRIOO75962 3097 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 AP1G2O75843 785 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 ABL1P00519 1130 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 USP17L7P0C7H9 530 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 CCDC130P13994 396 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 GLULP15104 373 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 TARSP26639 723 aaKnown RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 MAGEA9P43362 315 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 PDE6CP51160 858 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 CACNA2D1P54289 1103 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 USP46P62068 366 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 CCDC40Q4G0X9 1142 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 ZC3H3Q8IXZ2 948 aaKnown RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 NUP93Q8N1F7 819 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 ARL14EPQ8N8R7 260 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 TTC8Q8TAM2 541 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 SLC2A14Q8TDB8 520 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 SEMA4DQ92854 862 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 USP13Q92995 863 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 SMARCD1Q96GM5 515 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 MSANTD3Q96H12 275 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 CEP63Q96MT8 703 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 LRRC3BQ96PB8 259 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 SLITRK1Q96PX8 696 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 NT5C1AQ9BXI3 368 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 C8orf33Q9H7E9 229 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 METTL14Q9HCE5 456 aaKnown RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 DMAP1Q9NPF5 467 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 KRT82Q9NSB4 513 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 FAM49BQ9NUQ9 324 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 SPATA6Q9NWH7 488 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 HMGXB4Q9UGU5 601 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 TSR3Q9UJK0 312 aaKnown RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 CTNND2Q9UQB3 1225 aa10.09□□□□□ -0.79
USP15-208ENST00000548524 MTF2Q9Y483 593 aaPredicted RBP10.09□□□□□ -0.79
USP15-208ENST00000548524 NOTCH4Q99466 2003 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 C2orf78A6NCI8 922 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 ARNTLO00327 626 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 RTN3O95197 1032 aaPredicted RBP10.08□□□□□ -0.8
USP15-208ENST00000548524 FAM200BP0CF97 657 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CD46P15529 392 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 HDCP19113 662 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 YWHAQP27348 245 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 ADORA2BP29275 332 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 PPP3CCP48454 512 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 STX17P56962 302 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 INCA1Q0VD86 236 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 TAF10Q12962 218 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 PAK1Q13153 545 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 MORC3Q14149 939 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 ZNF268Q14587 947 aaPredicted RBP10.08□□□□□ -0.8
USP15-208ENST00000548524 CAMK4Q16566 473 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CBWD6Q4V339 395 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CBWD3Q5JTY5 395 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CBWD5Q5RIA9 395 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 FRMD5Q7Z6J6 570 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 FILIP1Q7Z7B0 1213 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 ALYREFQ86V81 257 aaKnown RBP10.08□□□□□ -0.8
USP15-208ENST00000548524 C1orf210Q8IVY1 113 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 FUKQ8N0W3 1084 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CRYBG2Q8N1P7 616 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 C12orf29Q8N999 325 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 PDZD8Q8NEN9 1154 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 FBXO32Q969P5 355 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CYP2S1Q96SQ9 504 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 KCNK16Q96T55 309 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 TTLL2Q9BWV7 592 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 CCL26Q9Y258 94 aa10.08□□□□□ -0.8
USP15-208ENST00000548524 DOCK8Q8NF50 2099 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 MYO10Q9HD67 2058 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 ZNF840PA6NDX5 716 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 SPECC1L-ADORA2AF8WAN1 911 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 LAMTOR5O43504 91 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 CILPO75339 1184 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
USP15-208ENST00000548524 PFKLP17858 780 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 BMP6P22004 513 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 SOX9P48436 509 aa10.07□□□□□ -0.8
USP15-208ENST00000548524 IFNAR2P48551 515 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms