RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CNGA2Q16280 664 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 FBXO47Q5MNV8 452 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 WSCD1Q658N2 575 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 PALM2Q8IXS6 379 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.31□□□□□ -0.283e-6■■■■■ 50.8
SCAF11-209ENST00000547018 CFAP36Q96G28 342 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 RHOBTB2Q9BYZ6 727 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 ASNSD1Q9NWL6 643 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 NAALADL1Q9UQQ1 740 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 MFHAS1Q9Y4C4 1052 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 TTLL3Q9Y4R7 772 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 WDR90Q96KV7 1748 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 HUS1O60921 280 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 KRT7P08729 469 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 DRG2P55039 364 aaKnown RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 NUGGCQ68CJ6 796 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 LRRC34Q8IZ02 419 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 CCDC110Q8TBZ0 833 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 PYROXD1Q8WU10 500 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 RUNDC3BQ96NL0 473 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 PAAF1Q9BRP4 392 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 RAB6BQ9NRW1 208 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 WHRNQ9P202 907 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 TTC3P53804 2025 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 SHOX2O60902 331 aaPredicted RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 APRTP07741 180 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 BCAR1P56945 870 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 PPP1R21Q6ZMI0 780 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 ZNF518BQ9C0D4 1074 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 CAPN7Q9Y6W3 813 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 ATP8B3O60423 1300 aa13.31□□□□□ -0.28
SCAF11-209ENST00000547018 PAPSS1O43252 624 aaPredicted RBP13.3□□□□□ -0.28
SCAF11-209ENST00000547018 GHRP10912 638 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 CRHR2Q13324 411 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 PPP2R5DQ14738 602 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 NME8Q8N427 588 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 TXLNGYQ9BZA5 131 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 NUDT5Q9UKK9 219 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 NRCAMQ92823 1304 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 C17orf102A2RUQ5 167 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 TCP11X1B4DZS4 312 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 GPR32O75388 356 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 STX2P32856 288 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 RPL22P35268 128 aaKnown RBP13.3□□□□□ -0.28
SCAF11-209ENST00000547018 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 SLC25A11Q02978 314 aaKnown RBP13.3□□□□□ -0.28
SCAF11-209ENST00000547018 TCEAL1Q15170 157 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 MSS51Q4VC12 460 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 CCNYQ8ND76 341 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 FAF2Q96CS3 445 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 FGFR1OP2Q9NVK5 253 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 IPPQ9Y573 584 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 RPS6KA5O75582 802 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
SCAF11-209ENST00000547018 PAEPP09466 180 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 MAN1A1P33908 653 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 GRM5P41594 1212 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 HIF1AQ16665 826 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 FAM133BQ5BKY9 247 aaKnown RBP13.3□□□□□ -0.28
SCAF11-209ENST00000547018 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 FBXW10Q5XX13 1052 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 CASC4Q6P4E1 433 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 ADAM7Q9H2U9 754 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 GABRQQ9UN88 632 aa13.3□□□□□ -0.28
SCAF11-209ENST00000547018 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 CAPN9O14815 690 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 F7P08709 466 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 THPOP40225 353 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 FNBP1LQ5T0N5 605 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 C3orf62Q6ZUJ4 267 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 EDEM1Q92611 657 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 XPO7Q9UIA9 1087 aaKnown RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 NUP205Q92621 2012 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 E2F8A0AVK6 867 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 M0QZ92 97 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 CYB561D2O14569 222 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 BEST1O76090 585 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 AMPD1P23109 780 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 RBL1P28749 1068 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 SCNN1GP51170 649 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms