RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 UBE3AQ05086 875 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 ELAVL2Q12926 359 aaKnown RBP6.79□□□□□ -1.32
PRKDC-211ENST00000546304 GPM6BQ13491 265 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 TRPC3Q13507 836 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 IQCB1Q15051 598 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 TCP11X2Q5H9J9 407 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 HGSNATQ68CP4 663 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 KRT39Q6A163 491 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 DCLRE1AQ6PJP8 1040 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 CD300LGQ6UXG3 332 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 LUZP1Q86V48 1076 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 ANKRD20A12PQ8NF67 263 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 TAS1R2Q8TE23 839 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 HERC2P3Q9BVR0 1158 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 GPR62Q9BZJ7 368 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 IMPG2Q9BZV3 1241 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 ZBP1Q9H171 429 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 HSD3B7Q9H2F3 369 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 PRDM12Q9H4Q4 367 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 LIN7BQ9HAP6 207 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 ALG13Q9NP73 1137 aaKnown RBP6.79□□□□□ -1.32
PRKDC-211ENST00000546304 ENTPD7Q9NQZ7 604 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 TLR9Q9NR96 1032 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 TAB2Q9NYJ8 693 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 GCNT4Q9P109 453 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 STK39Q9UEW8 545 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 AGAP1Q9UPQ3 857 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 LZTS1Q9Y250 596 aa6.79□□□□□ -1.32
PRKDC-211ENST00000546304 PATJQ8NI35 1801 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 MTCL1Q9Y4B5 1905 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 ARHGEF37A1IGU5 675 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 MEGF11A6BM72 1044 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 SMTNL1A8MU46 457 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 GOLGA6L19H0YKK7 550 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 I3L4J1 428 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 M0QZQ0 153 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 SYN3O14994 580 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 GRM6O15303 877 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 P4HA2O15460 535 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TRAPPC3O43617 180 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 LPXNO60711 386 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 EFEMP2O95967 443 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 ASS1P00966 412 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 C4BPAP04003 597 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 ATP1A3P13637 1013 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 PAX3P23760 479 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 IGFBP6P24592 240 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 DNAJB1P25685 340 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TKTP29401 623 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 LILRA4P59901 499 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 MYL6P60660 151 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TNNC1P63316 161 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TPM4P67936 248 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 MYO1EQ12965 1108 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 KRT31Q15323 416 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 PTPN14Q15678 1187 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 USP41Q3LFD5 358 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TIGD5Q53EQ6 642 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 MIIPQ5JXC2 388 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 RTP2Q5QGT7 225 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 FAM171A1Q5VUB5 890 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 PLPP4Q5VZY2 271 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 ANKRD34AQ69YU3 496 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 SCARA3Q6AZY7 606 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 SCARA5Q6ZMJ2 495 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 Q7L0L9 218 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 DDX53Q86TM3 631 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 CREBRFQ8IUR6 639 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 VPS52Q8N1B4 723 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 RNF214Q8ND24 703 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 FBXL13Q8NEE6 735 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 SPPL3Q8TCT6 385 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 POF1BQ8WVV4 589 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 FAM46AQ96IP4 442 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 HPDLQ96IR7 371 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 B3GALT6Q96L58 329 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 SENP8Q96LD8 212 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 FAM161BQ96MY7 647 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TCF25Q9BQ70 676 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 TUBGCP2Q9BSJ2 902 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 LMAN2LQ9H0V9 348 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 XYLT2Q9H1B5 865 aa6.78□□□□□ -1.32
PRKDC-211ENST00000546304 PUF60Q9UHX1 559 aaKnown RBP6.78□□□□□ -1.32
PRKDC-211ENST00000546304 A0A096LPE4 126 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 A0A1W2PPZ6 126 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 LGALS16A8MUM7 142 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 METTL12A8MUP2 240 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 KPNA7A9QM74 516 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 RFXAPO00287 272 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PES1O00541 588 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 EIF1AYO14602 144 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PMM2O15305 246 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 TPM2P07951 284 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CTSAP10619 480 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 P4HA1P13674 534 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms