RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 SNX9Q9Y5X1 595 aa10.15□□□□□ -0.78
C2CD3-220ENST00000544293 CPQQ9Y646 472 aa10.15□□□□□ -0.78
C2CD3-220ENST00000544293 SCN1AP35498 2009 aa10.15□□□□□ -0.78
C2CD3-220ENST00000544293 PTPRJQ12913 1337 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 IGHV1OR15-9A0A0B4J2B8 117 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TCRBV21S2A2A0A5A6 115 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 MYMKA6NI61 221 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 ALDH1A2O94788 518 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 BDNFP23560 247 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 HOXD12P35452 270 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 EIF2DP41214 584 aaKnown RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 GRIA2P42262 883 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TNFRSF4P43489 277 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 PSMC1P62191 440 aaKnown RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TFAMQ00059 246 aaKnown RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 ZNF33AQ06730 810 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 GNL2Q13823 731 aaKnown RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 KCNB1Q14721 858 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TRIP6Q15654 476 aaKnown RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 HSF5Q4G112 596 aaPredicted RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 LY6G5CQ5SRR4 150 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 NT5DC4Q86YG4 428 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 SPATA2LQ8IUW3 424 aaPredicted RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 BRSK2Q8IWQ3 736 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TMEM86AQ8N2M4 240 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 CSGALNACT2Q8N6G5 542 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TOP6BLQ8N6T0 577 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 MDM1Q8TC05 714 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 SPATA18Q8TC71 538 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 MYLPFQ96A32 169 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 COL26A1Q96A83 441 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 SAAL1Q96ER3 474 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 ZNF419Q96HQ0 510 aaPredicted RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 ACOX2Q99424 681 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 FGFBP2Q9BYJ0 223 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 TRIM9Q9C026 710 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 SMPD4Q9NXE4 827 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 APC2O95996 2303 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 CITO14578 2027 aa10.14□□□□□ -0.79
C2CD3-220ENST00000544293 FLNBO75369 2602 aaKnown RBP10.14□□□□□ -0.79
C2CD3-220ENST00000544293 ITPR1Q14643 2758 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 TSC2P49815 1807 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 GREM1O60565 184 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 OPHN1O60890 802 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 HUS1O60921 280 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 DKK1O94907 266 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 IL18RAPO95256 599 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 CFIP05156 583 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 FTH1P19P0C7X4 201 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 PFKLP17858 780 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 PNPLA4P41247 253 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 LHX1P48742 406 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 PGFP49763 221 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 CASP5P51878 434 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 MYL7Q01449 175 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 GFPT1Q06210 699 aaPredicted RBP10.13□□□□□ -0.79
C2CD3-220ENST00000544293 ZNF423Q2M1K9 1284 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 RILPL1Q5EBL4 403 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 EOGTQ5NDL2 527 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 ARL6IP4Q66PJ3 421 aaKnown RBP10.13□□□□□ -0.79
C2CD3-220ENST00000544293 DENND5BQ6ZUT9 1274 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 USP49Q70CQ1 688 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 MARCH9Q86YJ5 346 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 ADGRF2Q8IZF7 708 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 LRRC52Q8N7C0 313 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 NAT16Q8N8M0 369 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 FAM184AQ8NB25 1140 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 CEP76Q8TAP6 659 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 HNRNPLLQ8WVV9 542 aaKnown RBP10.13□□□□□ -0.79
C2CD3-220ENST00000544293 POMGNT1Q8WZA1 660 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 CRELD1Q96HD1 420 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 PCED1BQ96HM7 432 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 ZNF560Q96MR9 790 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 FAM213AQ9BRX8 229 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 SLC6A17Q9H1V8 727 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 ZHX3Q9H4I2 956 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 PDE11AQ9HCR9 933 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 POLMQ9NP87 494 aaPredicted RBP10.13□□□□□ -0.79
C2CD3-220ENST00000544293 ARHGEF4Q9NR80 690 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 TOR4AQ9NXH8 423 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 CALCOCO1Q9P1Z2 691 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 CFAP97Q9P2B7 532 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
C2CD3-220ENST00000544293 STARD13Q9Y3M8 1113 aa10.13□□□□□ -0.79
C2CD3-220ENST00000544293 NBEAQ8NFP9 2946 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 GOLGA8IPA6NC78 632 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 GOLGA8JA6NMD2 632 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 SLC26A4O43511 780 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 TULP3O75386 442 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 APODP05090 189 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 PDGFRBP09619 1106 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 MAOBP27338 520 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 DDIT3P35638 169 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 WASP42768 502 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 NOP14P78316 857 aaKnown RBP10.12□□□□□ -0.79
C2CD3-220ENST00000544293 BNC1Q01954 994 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
C2CD3-220ENST00000544293 KDSRQ06136 332 aa10.12□□□□□ -0.79
C2CD3-220ENST00000544293 TAF10Q12962 218 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms