RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 UNC93AQ86WB7 457 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CCDC25Q86WR0 208 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 FAM172AQ8WUF8 416 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 RTP3Q9BQQ7 232 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 CFHR5Q9BXR6 569 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 KRT82Q9NSB4 513 aa14.36□□□□□ -0.11
HCFC2-202ENST00000544223 TP73O15350 636 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 SLC6A3Q01959 620 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 BST2Q10589 180 aaKnown RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 IFRD2Q12894 506 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 GLIPR1L2Q4G1C9 344 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 DNAJC21Q5F1R6 531 aaKnown RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 EMBQ6PCB8 327 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 LIMS2Q7Z4I7 341 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 MRPL10Q7Z7H8 261 aaKnown RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 RPAINQ86UA6 219 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 KCTD6Q8NC69 237 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 SLAIN1Q8ND83 568 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 FAM149B1Q96BN6 582 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 FAXDC2Q96IV6 333 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 ZDHHC18Q9NUE0 388 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 ASIC3Q9UHC3 531 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 PCYOX1Q9UHG3 505 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 GIT1Q9Y2X7 761 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 hCG_1818297A0A087WSY0 165 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 MOXD2PA6NHM9 499 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 BHMG1C9JSJ3 638 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 ARVCFO00192 962 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 TNFRSF8P28908 595 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 MAN1A1P33908 653 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 ZNF143P52747 638 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 PLCB3Q01970 1234 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 DHX9Q08211 1270 aaKnown RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 CYP1B1Q16678 543 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 CLEC20AQ6ZU45 233 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 TMCO2Q7Z6W1 182 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 TMEM110Q86TL2 294 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 LRRTM3Q86VH5 581 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 DBF4BQ8NFT6 615 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 UBLCP1Q8WVY7 318 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-202ENST00000544223 ARL8AQ96BM9 186 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 PPP1R12CQ9BZL4 782 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 LRRC19Q9H756 370 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 KIAA1257Q9ULG3 409 aa14.35□□□□□ -0.11
HCFC2-202ENST00000544223 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 GABRDO14764 452 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 ATP8B1O43520 1251 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 CST8O60676 142 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 ECEL1O95672 775 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 TRUB2O95900 331 aaKnown RBP14.34□□□□□ -0.11
HCFC2-202ENST00000544223 PECAM1P16284 738 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-202ENST00000544223 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
HCFC2-202ENST00000544223 KDELR1P24390 212 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 HSD17B3P37058 310 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 BCAT1P54687 386 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 PPP6R3Q5H9R7 873 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-202ENST00000544223 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-202ENST00000544223 GSTA5Q7RTV2 222 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 PYROXD2Q8N2H3 581 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 NIPA2Q8N8Q9 360 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 CAVIN3Q969G5 261 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 CENPHQ9H3R5 247 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 REV3LO60673 3130 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 NT5C1B-RDH14C9J2C7 533 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 NRP1O14786 923 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 RNF8O76064 485 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 GDF10P55107 478 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 TFDP3Q5H9I0 405 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 SYPL2Q5VXT5 272 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 ZNF598Q86UK7 904 aaKnown RBP14.34□□□□□ -0.11
HCFC2-202ENST00000544223 RCOR2Q8IZ40 523 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 PLVAPQ9BX97 442 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 NR2E3Q9Y5X4 410 aa14.34□□□□□ -0.11
HCFC2-202ENST00000544223 ZNF623O75123 536 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 RNF40O75150 1001 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 CABYRO75952 493 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 IFNB1P01574 187 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 CHKAP35790 457 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 CDH6P55285 790 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 HDAC4P56524 1084 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 DHX34Q14147 1143 aaKnown RBP14.33□□□□□ -0.12
HCFC2-202ENST00000544223 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 DEFB128Q7Z7B8 93 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
HCFC2-202ENST00000544223 HACE1Q8IYU2 909 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 SEC14L1Q92503 715 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 TNIP3Q96KP6 325 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 SMOQ99835 787 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 WDR35Q9P2L0 1181 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 PLAAQ9Y263 795 aa14.33□□□□□ -0.12
HCFC2-202ENST00000544223 MFHAS1Q9Y4C4 1052 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms