RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 DAGLAQ9Y4D2 1042 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 ASB3Q9Y575 518 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 GSAPA4D1B5 854 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 PITPNM1O00562 1244 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 XPO1O14980 1071 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 RHOBTB1O94844 696 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 DLATP10515 647 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 PF4V1P10720 104 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 KELP23276 732 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 HLA-FP30511 346 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 SLC26A3P40879 764 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 RNASELQ05823 741 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 LGALS3BPQ08380 585 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 IFI16Q16666 785 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 EDRF1Q3B7T1 1238 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 ZC3H18Q86VM9 953 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 MAPKAPK5Q8IW41 473 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 CARFQ8N187 725 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 MARCH10Q8NA82 808 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 GRIN3AQ8TCU5 1115 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 UHRF1Q96T88 793 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 TRIM55Q9BYV6 548 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 SIAEQ9HAT2 523 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 PPANQ9NQ55 473 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 PKD2L2Q9NZM6 624 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 ENOPH1Q9UHY7 261 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 GMEB2Q9UKD1 530 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 RGSL1A5PLK6 1076 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 OPHN1O60890 802 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 MTIF2P46199 727 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 CDK18Q07002 472 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 HABP2Q14520 560 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 TRIM71Q2Q1W2 868 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 LRIT3Q3SXY7 679 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 FBXO33Q7Z6M2 555 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 NRAPQ86VF7 1730 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 RALGPS2Q86X27 583 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 GSPT2Q8IYD1 628 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 MAGEB6Q8N7X4 407 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 TANKQ92844 425 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 TUBGCP3Q96CW5 907 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 TBCDQ9BTW9 1192 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 RHOBTB2Q9BYZ6 727 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 LMAN2LQ9H0V9 348 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 RNF41Q9H4P4 317 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 DENND2DQ9H6A0 471 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 HMG20BQ9P0W2 317 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 KCNN3Q9UGI6 736 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 GNEQ9Y223 722 aaKnown RBP9.24□□□□□ -0.93
VPS13D-212ENST00000543766 PCDHGB1Q9Y5G3 927 aa9.24□□□□□ -0.93
VPS13D-212ENST00000543766 TMEM120BA0PK00 339 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 RAG1P15918 1043 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 STMN1P16949 149 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ALDH18A1P54886 795 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 POU6F2P78424 691 aaPredicted RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ELF3P78545 371 aaPredicted RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 MRPS9P82933 396 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ALDH6A1Q02252 535 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 HERC3Q15034 1050 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 SLFN12Q8IYM2 578 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 HUS1BQ8NHY5 278 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 KCNG4Q8TDN1 519 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 SETDB2Q96T68 719 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 STK33Q9BYT3 514 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 TINAGL1Q9GZM7 467 aaPredicted RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 AP5M1Q9H0R1 490 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 MCCC2Q9HCC0 563 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ADGRG1Q9Y653 693 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 RGPD3A6NKT7 1758 aaPredicted RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 RGPD4Q7Z3J3 1758 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 SOCS5O75159 536 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 GNAI2P04899 355 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 GSTA2P09210 222 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 PABPC1P11940 636 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 CCT4P50991 539 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 SERINC3Q13530 473 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 FIGNQ5HY92 759 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 MAP4K1Q92918 833 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 B3GALT6Q96L58 329 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 DHRS9Q9BPW9 319 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ABCG8Q9H221 673 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 TFB2MQ9H5Q4 396 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 PCDH10Q9P2E7 1040 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ADGRE2Q9UHX3 823 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 SYN3O14994 580 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 PRG2P13727 222 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 EEF1GP26641 437 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 PRKCIP41743 596 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 ZCWPW2Q504Y3 356 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 HECTD3Q5T447 861 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 CCDC28AQ8IWP9 274 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 AENQ8WTP8 325 aaKnown RBP9.23□□□□□ -0.93
VPS13D-212ENST00000543766 SLC44A1Q8WWI5 657 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 PPP1R2P1Q96PQ5 205 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 CRB3Q9BUF7 120 aa9.23□□□□□ -0.93
VPS13D-212ENST00000543766 AP4E1Q9UPM8 1137 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms