RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 DR1Q01658 176 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DLX2Q07687 328 aaPredicted RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 ZNF211Q13398 564 aaPredicted RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 PUS10Q3MIT2 529 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 HSP90B2PQ58FF3 399 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 SPDYCQ5MJ68 293 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 UBXN11Q5T124 520 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DUPD1Q68J44 220 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DNAJC24Q6P3W2 148 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DCUN1D2Q6PH85 259 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 LCLAT1Q6UWP7 414 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 ADGRD2Q7Z7M1 963 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 RCOR2Q8IZ40 523 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 PRELID2Q8N945 189 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 KLHL23Q8NBE8 558 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 C1orf131Q8NDD1 294 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 EXD1Q8NHP7 514 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 FAM71BQ8TC56 605 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 MICAL1Q8TDZ2 1067 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 IFT81Q8WYA0 676 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 SLCO2A1Q92959 643 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 PPP2R3CQ969Q6 453 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 MAGOHBQ96A72 148 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 MCRS1Q96EZ8 462 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DDX27Q96GQ7 796 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 ZMAT2Q96NC0 199 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 ERP44Q9BS26 406 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 EIF2AQ9BY44 585 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 TRIM7Q9C029 511 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 ELOVL4Q9GZR5 314 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 LMAN2LQ9H0V9 348 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 LRRC19Q9H756 370 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 SMYD3Q9H7B4 428 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 RC3H2Q9HBD1 1191 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 GDAP2Q9NXN4 497 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 DDX56Q9NY93 547 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 CHORDC1Q9UHD1 332 aaPredicted RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 NFU1Q9UMS0 254 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 ST3GAL5Q9UNP4 418 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 PIN4Q9Y237 131 aaKnown RBP6.9□□□□□ -1.3
VEGFB-203ENST00000541681 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
VEGFB-203ENST00000541681 VWA8A3KMH1 1905 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 SMIM28A0A1B0GU29 152 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 FAM170AA1A519 330 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 C5orf67F2Z3F1 127 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 O00370 1275 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 GPR182O15218 404 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 TTI1O43156 1089 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 OPA1O60313 960 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 HSF2BPO75031 334 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 RECQL4O94761 1208 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 MICAL2O94851 1124 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 LINC00271P0C7V0 271 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 RARAP10276 462 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 KRT3P12035 628 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 HSPA9P38646 679 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 RPL7AP62424 266 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 MRPS25P82663 173 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 ZP2Q05996 745 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 HLTFQ14527 1009 aaKnown RBP eCLIP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 SIX1Q15475 284 aaPredicted RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 CCNG2Q16589 344 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 PTPN20Q4JDL3 420 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 C2CD6Q53TS8 623 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 PLPP4Q5VZY2 271 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 C9orf57Q5W0N0 161 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 AADACL2Q6P093 401 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 DENND1BQ6P3S1 775 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 CCDC137Q6PK04 289 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 SYDE1Q6ZW31 735 aaPredicted RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 RTN4RL1Q86UN2 441 aaPredicted RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 FAM228AQ86W67 206 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 XYLT1Q86Y38 959 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 CPNE8Q86YQ8 564 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 JAMLQ86YT9 394 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 ZDHHC14Q8IZN3 488 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 ABI1Q8IZP0 508 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 IQCKQ8N0W5 287 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 CRYBG2Q8N1P7 616 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 GRK7Q8WTQ7 553 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 STK32AQ8WU08 396 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 CLP1Q92989 425 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 LRRC45Q96CN5 670 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 ZNF689Q96CS4 500 aaPredicted RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 RBM41Q96IZ5 413 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
VEGFB-203ENST00000541681 ZNF560Q96MR9 790 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 TWNKQ96RR1 684 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 NCAPGQ9BPX3 1015 aa6.89□□□□□ -1.31
VEGFB-203ENST00000541681 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms