RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ITGB3P05106 788 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 GABRG2P18507 467 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 PLCG1P19174 1290 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
COPA-205ENST00000541366 TFAMQ00059 246 aaKnown RBP12.64□□□□□ -0.39
COPA-205ENST00000541366 SPDYCQ5MJ68 293 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 LMBRD2Q68DH5 695 aaPredicted RBP12.64□□□□□ -0.39
COPA-205ENST00000541366 SLCO6A1Q86UG4 719 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 PHTF2Q8N3S3 785 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 NAT16Q8N8M0 369 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 ADAMTS14Q8WXS8 1223 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 ZNF560Q96MR9 790 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 PARVGQ9HBI0 331 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 KCND2Q9NZV8 630 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 CALCOCO1Q9P1Z2 691 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 HCN2Q9UL51 889 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 CPQQ9Y646 472 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 LAD1O00515 517 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 TRIM24O15164 1050 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 AP5Z1O43299 807 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 HUS1O60921 280 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 BDNFP23560 247 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 LMO2P25791 158 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 ADSSP30520 456 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 HOXD12P35452 270 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 GRIA2P42262 883 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 ZNF131P52739 623 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 GTF2BQ00403 316 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 MYL7Q01449 175 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 BYSLQ13895 437 aaKnown RBP12.63□□□□□ -0.39
COPA-205ENST00000541366 MCM6Q14566 821 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 MIB1Q86YT6 1006 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 CXorf38Q8TB03 319 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
COPA-205ENST00000541366 CFAP97Q9P2B7 532 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 CYP8B1Q9UNU6 501 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 STYXL1Q9Y6J8 313 aa12.63□□□□□ -0.39
COPA-205ENST00000541366 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 ABL1P00519 1130 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 PRB1P04280 392 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 MAOBP27338 520 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 DPP6P42658 865 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 SOWAHAQ2M3V2 549 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 LY6G5CQ5SRR4 150 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 NAXDQ8IW45 347 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 ZNF513Q8N8E2 541 aaPredicted RBP12.62□□□□□ -0.39
COPA-205ENST00000541366 TRIML1Q8N9V2 468 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 ADAM32Q8TC27 787 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 POMGNT1Q8WZA1 660 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 HSPA12BQ96MM6 686 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 SLC6A17Q9H1V8 727 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 CRTAC1Q9NQ79 661 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 BLOC1S4Q9NUP1 217 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 TRPM5Q9NZQ8 1165 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 KALRNO60229 2985 aa12.62□□□□□ -0.39
COPA-205ENST00000541366 TBC1D3BA6NDS4 549 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 ZNF840PA6NDX5 716 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 GABRDO14764 452 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
COPA-205ENST00000541366 ADH5P11766 374 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 GRIK1P39086 918 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 PNPLA4P41247 253 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 MAGEA11P43364 429 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 CLCN6P51797 869 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 SLC7A9P82251 487 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 KCNA1Q09470 495 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
COPA-205ENST00000541366 FAM171BQ6P995 826 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 DENND5BQ6ZUT9 1274 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 RGL4Q8IZJ4 473 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 CSGALNACT2Q8N6G5 542 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
COPA-205ENST00000541366 ACOX2Q99424 681 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 LLPHQ9BRT6 129 aaKnown RBP12.61□□□□□ -0.39
COPA-205ENST00000541366 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 SIX4Q9UIU6 781 aa12.61□□□□□ -0.39
COPA-205ENST00000541366 A0A1W2PQF6 199 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 EIF4E1BA6NMX2 242 aaKnown RBP12.6□□□□□ -0.39
COPA-205ENST00000541366 IL18RAPO95256 599 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 OLFM2O95897 454 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 ADH1CP00326 375 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 SYPP08247 313 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms