RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 ALDH7A1P49419 539 aaKnown RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 CDK17Q00537 523 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 INCA1Q0VD86 236 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 CUL2Q13617 745 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 TRIP12Q14669 1992 aaPredicted RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 MAPRE1Q15691 268 aaKnown RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 NAB2Q15742 525 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 RAB30Q15771 203 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 UPP1Q16831 310 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 WDR72Q3MJ13 1102 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 SEZ6Q53EL9 994 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 HS1BP3Q53T59 392 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 CLLU1OSQ5K130 101 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 TMEM240Q5SV17 173 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 C9orf57Q5W0N0 161 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 ZNF365Q70YC5 407 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 TMC6Q7Z403 805 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 VN1R5Q7Z5H4 357 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 METTL23Q86XA0 190 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 TMEM192Q8IY95 271 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 COLGALT2Q8IYK4 626 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 PPM1KQ8N3J5 372 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 OR5B17Q8NGF7 314 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 OR8K1Q8NGG5 319 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 LMO3Q8TAP4 145 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 SHC3Q92529 594 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 TNIP3Q96KP6 325 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 ZMAT2Q96NC0 199 aaKnown RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 ZNF558Q96NG5 402 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 NAP1L5Q96NT1 182 aaPredicted RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 CASD1Q96PB1 797 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 PPP1R9BQ96SB3 815 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 YME1L1Q96TA2 773 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 DNAJC7Q99615 494 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 RAD9AQ99638 391 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 FAM83CQ9BQN1 747 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 LSM14BQ9BX40 385 aaKnown RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 BCO2Q9BYV7 579 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 TTYH3Q9C0H2 523 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 XYLT2Q9H1B5 865 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 GANQ9H2C0 597 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 LUC7LQ9NQ29 371 aaKnown RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 FAM207AQ9NSI2 230 aaPredicted RBP6.12□□□□□ -1.43
CDKN3-206ENST00000541304 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 PLAGL2Q9UPG8 496 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 AGAP1Q9UPQ3 857 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 SSX2IPQ9Y2D8 614 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 INPP5FQ9Y2H2 1132 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 PCDHB12Q9Y5F1 795 aa6.12□□□□□ -1.43
CDKN3-206ENST00000541304 PTPRJQ12913 1337 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 SSU72P8A0A1W2PR75 194 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 TBKBP1A7MCY6 615 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 F8VZ95 297 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 H7C4K7 107 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 M0QZQ0 153 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 TEX33O43247 280 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 MED7O43513 233 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 B3GAT3O94766 335 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 IPO7O95373 1038 aaKnown RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 VNN1O95497 513 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 C1RP00736 705 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 POMCP01189 267 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 GYPCP04921 128 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CYP11A1P05108 521 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 RB1P06400 928 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 PTMAP06454 111 aaKnown RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 FGFR1P11362 822 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 PRKCIP41743 596 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 PDE6CP51160 858 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 LILRA4P59901 499 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 MYL6P60660 151 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 POLR2FP61218 127 aaKnown RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 KRT17Q04695 432 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 UBE3AQ05086 875 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 TBX2Q13207 712 aaPredicted RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 RAPGEF1Q13905 1077 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 BTG3Q14201 252 aaPredicted RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 GLRA4Q5JXX5 417 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 SFMBT2Q5VUG0 894 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 HGSNATQ68CP4 663 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 PHLDB3Q6NSJ2 640 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 OTOP2Q7RTS6 562 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 LIMS2Q7Z4I7 341 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 HERC6Q8IVU3 1022 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 FIBCD1Q8N539 461 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 ZSWIM2Q8NEG5 633 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 LPPQ93052 612 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 VWCEQ96DN2 955 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 RNPC3Q96LT9 517 aaKnown RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CRACR2AQ9BSW2 395 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 MIS12Q9H081 205 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CYP4F12Q9HCS2 524 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 SIX2Q9NPC8 291 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 UBE2TQ9NPD8 197 aaPredicted RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 LATS2Q9NRM7 1088 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 RNF19AQ9NV58 838 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms