RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 GDAP2Q9NXN4 497 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 LAMA2P24043 3122 aaKnown RBP16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 LRPAP1P30533 357 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 SLC8A1P32418 973 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 SSR1P43307 286 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 DR1Q01658 176 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 TAX1BP1Q86VP1 789 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 HOOK3Q86VS8 718 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 C3orf58Q8NDZ4 430 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 RAB17Q9H0T7 212 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ADAM7Q9H2U9 754 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 SNX25Q9H3E2 840 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ZDHHC18Q9NUE0 388 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 SLC38A7Q9NVC3 462 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 BAIAP2L1Q9UHR4 511 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 TCRBV5S1A1TA0A578 114 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PROSCO94903 275 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PYGMP11217 842 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 CCDC130P13994 396 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 GJC1P36383 396 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 RGS7P49802 495 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 RAB27AP51159 221 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PMS2P54278 862 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PLTPP55058 493 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 CCDC142Q17RM4 750 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PAN2Q504Q3 1202 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 DUPD1Q68J44 220 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 LCLAT1Q6UWP7 414 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ADGRF2Q8IZF7 708 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ATXN2LQ8WWM7 1075 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ERP44Q9BS26 406 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 NOD2Q9HC29 1040 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PCDHA3Q9Y5H8 950 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 CYB561D2O14569 222 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ZNF623O75123 536 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 RPSAP08865 295 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 IFI35P80217 286 aaPredicted RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 OGDHQ02218 1023 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 LRRC34Q8IZ02 419 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 ANKS4BQ8N8V4 417 aa16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
CLPTM1-202ENST00000541297 PODXLO00592 558 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 PFKMP08237 780 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 ACAT1P24752 427 aaKnown RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 ADORA2BP29275 332 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 MMP13P45452 471 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 ACCSLQ4AC99 568 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 UBAP2Q5T6F2 1119 aaKnown RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 PIGWQ7Z7B1 504 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 OSTM1Q86WC4 334 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 TTC30AQ86WT1 665 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 XYLT1Q86Y38 959 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 PABPC3Q9H361 631 aaKnown RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 FAM124BQ9H5Z6 455 aaPredicted RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 KIAA1257Q9ULG3 409 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 STRIP2Q9ULQ0 834 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 TTC7AQ9ULT0 858 aaPredicted RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 SNX24Q9Y343 169 aa16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.16
CLPTM1-202ENST00000541297 TET1Q8NFU7 2136 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 TMEM191CA6NGB0 347 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 PQBP1O60828 265 aaKnown RBP16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 CCL5P13501 91 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 TAS2R40P59535 323 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 SPDYCQ5MJ68 293 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 WSCD1Q658N2 575 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 TLDC1Q6P9B6 456 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 UNC93AQ86WB7 457 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 ECHDC2Q86YB7 292 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 HASPINQ8TF76 798 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 ELAC2Q9BQ52 826 aaKnown RBP16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 TRAIPQ9BWF2 469 aa16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 METTL5Q9NRN9 209 aaKnown RBP16.02■□□□□ 0.15
CLPTM1-202ENST00000541297 F8VP50 259 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 I3L4J1 428 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 NUDT17P0C025 328 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 TCF4P15884 667 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 CTNNA2P26232 953 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 RFC1P35251 1148 aaPredicted RBP16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 RWDD2BP57060 319 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 PPP1R15BQ5SWA1 713 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 DENND2CQ68D51 928 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 LRRC8DQ7L1W4 858 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 KIRREL3Q8IZU9 778 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 EMC1Q8N766 993 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 JOSD2Q8TAC2 188 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 UHMK1Q8TAS1 419 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 PRMT1Q99873 361 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 E5RJQ4 531 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 KRT3P12035 628 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SLC1A1P43005 524 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms