RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 CDR2Q01850 454 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 CBX2Q14781 532 aaPredicted RBP18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 ASIC2Q16515 512 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 DDR2Q16832 855 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 STKLD1Q8NE28 680 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 OR8K1Q8NGG5 319 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 SUSD6Q92537 303 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 BAP1Q92560 729 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 ACSF2Q96CM8 615 aaPredicted RBP18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 CDK5RAP1Q96SZ6 601 aaKnown RBP18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 LRRC4Q9HBW1 653 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 TMEM51Q9NW97 253 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 IMPACTQ9P2X3 320 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 PRKAG3Q9UGI9 489 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 MUC6Q6W4X9 2439 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 PTPRDP23468 1912 aa18.49■□□□□ 0.55
CLSTN3-210ENST00000540931 LRRC53A6NM62 1247 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 PI4K2BG5E9Z4 385 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 MBTPS2O43462 519 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 RHOP08100 348 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 DLX2Q07687 328 aaPredicted RBP18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 SMAD2Q15796 467 aaKnown RBP18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 PKDCCQ504Y2 493 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 OTOP3Q7RTS5 596 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 TADA2BQ86TJ2 420 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 SLC47A2Q86VL8 602 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 ZDHHC17Q8IUH5 632 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 PLCD3Q8N3E9 789 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 EPS8L1Q8TE68 723 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 SLC35F5Q8WV83 523 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 TFAP2BQ92481 460 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 SMOQ99835 787 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 CORO1BQ9BR76 489 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 CNGB3Q9NQW8 809 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 GDE1Q9NZC3 331 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 IL37Q9NZH6 218 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 TRPM5Q9NZQ8 1165 aa18.48■□□□□ 0.55
CLSTN3-210ENST00000540931 FAM92AA1XBS5 289 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 H3BQ06 376 aaPredicted RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 FSHRP23945 695 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 HNRNPH3P31942 346 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 CDH5P33151 784 aaPredicted RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 GPD2P43304 727 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 MRE11P49959 708 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 SLC5A3P53794 718 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 RBM10P98175 930 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 PDE4CQ08493 712 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 KLHL30Q0D2K2 578 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 PTCRAQ6ISU1 281 aaPredicted RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 SIX6OS1Q8N1H7 587 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 TTC9BQ8N6N2 239 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 C12orf76Q8N812 135 aaPredicted RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 MRPS31Q92665 395 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 KCNK16Q96T55 309 aa18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 TLR8Q9NR97 1041 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 DNMT3BQ9UBC3 853 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 AJAP1Q9UKB5 411 aaPredicted RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 MRPS23Q9Y3D9 190 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 USP15Q9Y4E8 981 aaPredicted RBP18.47■□□□□ 0.55
CLSTN3-210ENST00000540931 GRXCR2A6NFK2 248 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 AKR1B15C9JRZ8 316 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 TNFRSF10BO14763 440 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 GYPCP04921 128 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 SERPING1P05155 500 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 CASP14P31944 242 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 KIF11P52732 1056 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 ARID5BQ14865 1188 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 RAB41Q5JT25 222 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 GRASPQ7Z6J2 395 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 PIGZQ86VD9 579 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 MON1AQ86VX9 555 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 TTC30AQ86WT1 665 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 GIPC2Q8TF65 315 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 IRGQQ8WZA9 623 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 E2F7Q96AV8 911 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 LPIN3Q9BQK8 851 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 PHF7Q9BWX1 381 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 MAGED2Q9UNF1 606 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 SCML2Q9UQR0 700 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 USP3Q9Y6I4 520 aa18.46■□□□□ 0.55
CLSTN3-210ENST00000540931 MYH10P35580 1976 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 FAM86C2PA6NEL3 165 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 HMGA1P17096 107 aaKnown RBP18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 TNFAIP3P21580 790 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 WEE1P30291 646 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 RPL34P49207 117 aaKnown RBP18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 TUBP50607 506 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 SNX30Q5VWJ9 437 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 CCDC186Q7Z3E2 898 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 TMC6Q7Z403 805 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 IRF2BP2Q7Z5L9 587 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 ZNF276Q8N554 614 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 C1orf131Q8NDD1 294 aaKnown RBP18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 ZMIZ2Q8NF64 920 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 CPLX3Q8WVH0 158 aa18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 DDX1Q92499 740 aaKnown RBP18.45■□□□□ 0.54
CLSTN3-210ENST00000540931 SECISBP2LQ93073 1101 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms