RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 LILRB5O75023 590 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ATP2C2O75185 946 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ADH1CP00326 375 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ABL1P00519 1130 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 GPR15P49685 360 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 USP4Q13107 963 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 PON2Q15165 354 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF77Q15935 545 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF658Q5TYW1 1059 aaPredicted RBP11.02□□□□□ -0.65
CDCA3-208ENST00000540683 C11orf74Q86VG3 221 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 LONP2Q86WA8 852 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF516Q92618 1163 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 FBXO32Q969P5 355 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 RSPRY1Q96DX4 576 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
CDCA3-208ENST00000540683 P2RY13Q9BPV8 354 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 NIF3L1Q9GZT8 377 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 ECT2Q9H8V3 914 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 METTL14Q9HCE5 456 aaKnown RBP11.02□□□□□ -0.65
CDCA3-208ENST00000540683 TLR8Q9NR97 1041 aaKnown RBP11.02□□□□□ -0.65
CDCA3-208ENST00000540683 PCDHA5Q9Y5H7 936 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 COL4A2P08572 1712 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 BICDL2A1A5D9 508 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 PRR5-ARHGAP8B1AHC4 643 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 LRRN2O75325 713 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 AP1G2O75843 785 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 AKAP3O75969 853 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 FGFR1OPO95684 399 aaKnown RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 EIF2DP41214 584 aaKnown RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 CASP4P49662 377 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 MXI1P50539 228 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 ARHGAP8P85298 464 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 INCA1Q0VD86 236 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 TAF10Q12962 218 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 FZD5Q13467 585 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 CCINQ13939 588 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 HSF5Q4G112 596 aaPredicted RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 TMEM196Q5HYL7 178 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 HECTD3Q5T447 861 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 SDHAF4Q5VUM1 108 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 SNX30Q5VWJ9 437 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 BTBD8Q5XKL5 378 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 LAIR1Q6GTX8 287 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 POTEHQ6S545 545 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 ERMP1Q7Z2K6 904 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 FAM35AQ86V20 835 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 MAML2Q8IZL2 1156 aaPredicted RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 FMR1NBQ8N0W7 255 aaPredicted RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 ARHGAP18Q8N392 663 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 FBXL13Q8NEE6 735 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 CD101Q93033 1021 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 ZFYVE19Q96K21 471 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 EBF3Q9H4W6 596 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 KRT82Q9NSB4 513 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 GCNT4Q9P109 453 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 LSM7Q9UK45 103 aaKnown RBP11.01□□□□□ -0.65
CDCA3-208ENST00000540683 OBSL1O75147 1896 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 PTPRDP23468 1912 aa11.01□□□□□ -0.65
CDCA3-208ENST00000540683 KIF26AQ9ULI4 1882 aaPredicted RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 GREB1Q4ZG55 1949 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 E2F8A0AVK6 867 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 CHURC1-FNTBB4DL54 471 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 ZBTB24O43167 697 aaPredicted RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 OLFM2O95897 454 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 MBL2P11226 248 aaPredicted RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 MCCD1P59942 119 aaPredicted RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 LMNB2Q03252 620 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 TNK2Q07912 1038 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 SCARA5Q6ZMJ2 495 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 TRMT11Q7Z4G4 463 aaKnown RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 DHTKD1Q96HY7 919 aaPredicted RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 HNRNPABQ99729 332 aaKnown RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 B3GNT5Q9BYG0 378 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 SMG9Q9H0W8 520 aaKnown RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 SMYD3Q9H7B4 428 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 CSNK1G1Q9HCP0 422 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11□□□□□ -0.658e-7■■■■■ 69.9
CDCA3-208ENST00000540683 ARMCX3Q9UH62 379 aaPredicted RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 SMG5Q9UPR3 1016 aaKnown RBP11□□□□□ -0.65
CDCA3-208ENST00000540683 CCL26Q9Y258 94 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 SH3BP1Q9Y3L3 701 aa11□□□□□ -0.65
CDCA3-208ENST00000540683 HELZP42694 1942 aaKnown RBP10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF292O60281 2723 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 C2orf78A6NCI8 922 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 LEFTY2O00292 366 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 TADA3O75528 432 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 VNN1O95497 513 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 GNA14O95837 355 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 OAS1P00973 400 aaKnown RBP10.99□□□□□ -0.65
CDCA3-208ENST00000540683 RALAP11233 206 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms