RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 LRRC32Q14392 662 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 PDGFRLQ15198 375 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 EML3Q32P44 896 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 COBLL1Q53SF7 1204 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 DGKKQ5KSL6 1271 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 FSTL4Q6MZW2 842 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 ZC3H3Q8IXZ2 948 aaKnown RBP17.82■□□□□ 0.44
DDB1-215ENST00000539712 NUP93Q8N1F7 819 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 C12orf29Q8N999 325 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 SCAMP5Q8TAC9 235 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 OSCP1Q8WVF1 389 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 SEMA4DQ92854 862 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 TNIP3Q96KP6 325 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 TWNKQ96RR1 684 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 SMOQ99835 787 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 PCDHA5Q9Y5H7 936 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 WNT6Q9Y6F9 365 aa17.82■□□□□ 0.44
DDB1-215ENST00000539712 FAM92AA1XBS5 289 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 K7ESF4 209 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 PAPSS2O95340 614 aaPredicted RBP17.81■□□□□ 0.44
DDB1-215ENST00000539712 CCDC130P13994 396 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 GJA4P35212 333 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 PIK3CAP42336 1068 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 CXCL12P48061 93 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 PPP3CCP48454 512 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 CCR3P51677 355 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 PMS1P54277 932 aaKnown RBP17.81■□□□□ 0.44
DDB1-215ENST00000539712 SLC7A9P82251 487 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 INCA1Q0VD86 236 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 ZNF658Q5TYW1 1059 aaPredicted RBP17.81■□□□□ 0.44
DDB1-215ENST00000539712 CC2D1AQ6P1N0 951 aaPredicted RBP17.81■□□□□ 0.44
DDB1-215ENST00000539712 PKN3Q6P5Z2 889 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 UNC93AQ86WB7 457 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 WHAMMQ8TF30 809 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 TIGD1Q96MW7 591 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 GSDMAQ96QA5 445 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 FAM126AQ9BYI3 521 aaPredicted RBP17.81■□□□□ 0.44
DDB1-215ENST00000539712 ECT2Q9H8V3 914 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 CSNK1G1Q9HCP0 422 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 DUS2Q9NX74 493 aaKnown RBP17.81■□□□□ 0.44
DDB1-215ENST00000539712 EHD2Q9NZN4 543 aa17.81■□□□□ 0.44
DDB1-215ENST00000539712 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
DDB1-215ENST00000539712 KRT13P13646 458 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 P4HA1P13674 534 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 GTF2H1P32780 548 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 PGFP49763 221 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 GALK1P51570 392 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 DMWDQ09019 674 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 ANKRD40Q6AI12 368 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 SYNPOQ8N3V7 929 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 SLC2A14Q8TDB8 520 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 ATRIPQ8WXE1 791 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 EZH1Q92800 747 aaPredicted RBP17.8■□□□□ 0.44
DDB1-215ENST00000539712 EPC1Q9H2F5 836 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 TMEM8AQ9HCN3 771 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 RMND1Q9NWS8 449 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 CHORDC1Q9UHD1 332 aaPredicted RBP17.8■□□□□ 0.44
DDB1-215ENST00000539712 CEP250Q9BV73 2442 aa17.8■□□□□ 0.44
DDB1-215ENST00000539712 HELZP42694 1942 aaKnown RBP17.79■□□□□ 0.44
DDB1-215ENST00000539712 LEFTY2O00292 366 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 AP1G2O75843 785 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 ZDHHC11BP0C7U3 371 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 YWHAQP27348 245 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 GAB4Q2WGN9 574 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 SNX30Q5VWJ9 437 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 DCLK2Q8N568 766 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 SMARCD1Q96GM5 515 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 ZFRQ96KR1 1074 aaKnown RBP17.79■□□□□ 0.44
DDB1-215ENST00000539712 SLITRK1Q96PX8 696 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 CYP3A43Q9HB55 503 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 DMAP1Q9NPF5 467 aaPredicted RBP17.79■□□□□ 0.44
DDB1-215ENST00000539712 KRT82Q9NSB4 513 aa17.79■□□□□ 0.44
DDB1-215ENST00000539712 GOLGA6L4A6NEF3 574 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 HHLA1C9JL84 531 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 CILPO75339 1184 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 CLSTN1O94985 981 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 RTN3O95197 1032 aaPredicted RBP17.78■□□□□ 0.44
DDB1-215ENST00000539712 EGFP01133 1207 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 PDE6CP51160 858 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 SLC5A3P53794 718 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 IFRD2Q12894 506 aaPredicted RBP17.78■□□□□ 0.44
DDB1-215ENST00000539712 KRT39Q6A163 491 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 ELOA2Q8IYF1 753 aaPredicted RBP17.78■□□□□ 0.44
DDB1-215ENST00000539712 TTC16Q8NEE8 873 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 OVCA2Q8WZ82 227 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 ATP2A3Q93084 1043 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 CCDC34Q96HJ3 373 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 HNRNPABQ99729 332 aaKnown RBP17.78■□□□□ 0.44
DDB1-215ENST00000539712 NIF3L1Q9GZT8 377 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 MMRN2Q9H8L6 949 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 FAM49BQ9NUQ9 324 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 CPQQ9Y646 472 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 ATG2BQ96BY7 2078 aa17.78■□□□□ 0.44
DDB1-215ENST00000539712 ATP8B3O60423 1300 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 TRIM49BA6NDI0 452 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 CETN3O15182 167 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 COCHO43405 550 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 GADD45BO75293 160 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms