RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 LINC00271P0C7V0 271 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 FGFR3P22607 806 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PAX3P23760 479 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 CASQ1P31415 396 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 NAP1L1P55209 391 aaKnown RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 HTRA4P83105 476 aaPredicted RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 OGDHQ02218 1023 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PDCLQ13371 301 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 BTG3Q14201 252 aaPredicted RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 RTP2Q5QGT7 225 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 VARS2Q5ST30 1063 aaKnown RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PLEKHA7Q6IQ23 1121 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 KCNT2Q6UVM3 1135 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PRSS55Q6UWB4 352 aaPredicted RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 SLFN11Q7Z7L1 901 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 CEP57Q86XR8 500 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 XYLT1Q86Y38 959 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 CMTR2Q8IYT2 770 aaKnown RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 SLC39A11Q8N1S5 342 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 ANKRD52Q8NB46 1076 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 COLGALT1Q8NBJ5 622 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 ZMIZ2Q8NF64 920 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 JOSD2Q8TAC2 188 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 MYCBPAPQ8TBZ2 947 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PCED1BQ96HM7 432 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PIWIL1Q96J94 861 aaKnown RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 TNIP3Q96KP6 325 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 NOX5Q96PH1 765 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 SMOQ99835 787 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 ACBD6Q9BR61 282 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 MED10Q9BTT4 135 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 SLC4A5Q9BY07 1137 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 AVENQ9NQS1 362 aaPredicted RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PACSIN2Q9UNF0 486 aaPredicted RBP9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 PCDHGC5Q9Y5F6 944 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 ACACBO00763 2458 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 ATRXP46100 2492 aa9.68□□□□□ -0.86
RTN4IP1-204ENST00000539449 E5RJQ4 531 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 KIF2AO00139 706 aaPredicted RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 SYN3O14994 580 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 ADAM12O43184 909 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 TBC1D4O60343 1298 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 OAZ2O95190 189 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 GJB5O95377 273 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 PCSK1P29120 753 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 GABRB2P47870 512 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 HADHBP55084 474 aaKnown RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 RPL7AP62424 266 aaKnown RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 AMPD2Q01433 879 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 YWHAHQ04917 246 aaPredicted RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 MAMLD1Q13495 774 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 MESDQ14696 234 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 STILQ15468 1287 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 SPOUT1Q5T280 376 aaKnown RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 TRNP1Q6NT89 227 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 CLEC20AQ6ZU45 233 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 FAM183BPQ6ZVS7 135 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 RNF168Q8IYW5 571 aaPredicted RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 THEM5Q8N1Q8 247 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 TXLNBQ8N3L3 684 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 FBXL6Q8N531 539 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 ZNF564Q8TBZ8 553 aaPredicted RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 SPATA18Q8TC71 538 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 CLEC4CQ8WTT0 213 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 NDRG1Q92597 394 aaKnown RBP9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 C18orf8Q96DM3 657 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 MCRS1Q96EZ8 462 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 VCPIP1Q96JH7 1222 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 KCNK16Q96T55 309 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 TLR10Q9BXR5 811 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 DUSP16Q9BY84 665 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 ZCWPW1Q9H0M4 648 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 HESX1Q9UBX0 185 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 DSEQ9UL01 958 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 MTUS1Q9ULD2 1270 aa9.67□□□□□ -0.86
RTN4IP1-204ENST00000539449 DNAH14Q0VDD8 3507 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 GREB1Q4ZG55 1949 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 WDR87Q6ZQQ6 2873 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 ZNF292O60281 2723 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 TMEM191CA6NGB0 347 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 HHLA1C9JL84 531 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 H0Y858 1186 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 PAPSS1O43252 624 aaPredicted RBP9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 TRAPPC3O43617 180 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 SRGAP2O75044 1071 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 AP1G2O75843 785 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 VNN2O95498 520 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 CALB1P05937 261 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 SETSIPP0DME0 302 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 MYBL1P10243 752 aa9.66□□□□□ -0.86
RTN4IP1-204ENST00000539449 LCP1P13796 627 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms