RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 SDE2Q6IQ49 451 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 RABEPKQ7Z6M1 372 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 FILIP1Q7Z7B0 1213 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 PDILTQ8N807 584 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 TCEAL3Q969E4 200 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 SYAP1Q96A49 352 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-203ENST00000537194 OTUB2Q96DC9 234 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 C8orf48Q96LL4 319 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 MED10Q9BTT4 135 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 TTLL2Q9BWV7 592 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 IKZF4Q9H2S9 585 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 ZSCAN16Q9H4T2 348 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-203ENST00000537194 ARHGEF4Q9NR80 690 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 RXFP3Q9NSD7 469 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 POLR3BQ9NW08 1133 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-203ENST00000537194 SMPD4Q9NXE4 827 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 HSPBP1Q9NZL4 362 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 SH3BP1Q9Y3L3 701 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 CPQQ9Y646 472 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 PTPRDP23468 1912 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 CEP192Q8TEP8 1941 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 KIAA1549LQ6ZVL6 1849 aa9.52□□□□□ -0.89
SMAD3-203ENST00000537194 KMT2BQ9UMN6 2715 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 LNP1A1A4G5 178 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 FRMD3A2A2Y4 597 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TBC1D3BA6NDS4 549 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF840PA6NDX5 716 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 A8MXQ7 604 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 F8VP50 259 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 EIF3DO15371 548 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TACC1O75410 805 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 KAT7O95251 611 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 ADH5P11766 374 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 P4HA1P13674 534 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 PTPN1P18031 435 aaKnown RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 LMO2P25791 158 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 HOXC13P31276 330 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TIE1P35590 1138 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 OPRD1P41143 372 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TNFRSF4P43489 277 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 CASP5P51878 434 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 GAD2Q05329 585 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 IFRD2Q12894 506 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 FOXC1Q12948 553 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TAF10Q12962 218 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 SNRNP35Q16560 246 aaKnown RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 WDR72Q3MJ13 1102 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TRIM61Q5EBN2 209 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 SPDYCQ5MJ68 293 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 NAIF1Q69YI7 327 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 SLC36A4Q6YBV0 504 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TRAPPC11Q7Z392 1133 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 RASSF3Q86WH2 238 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 ADGRG2Q8IZP9 1017 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 NUP93Q8N1F7 819 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 HDDC3Q8N4P3 179 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 IQUBQ8NA54 791 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TXNDC5Q8NBS9 432 aaKnown RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 ZSWIM2Q8NEG5 633 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 CEP76Q8TAP6 659 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 RIN3Q8TB24 985 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 OVCA2Q8WZ82 227 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 FBXO32Q969P5 355 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 PCED1BQ96HM7 432 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TNIP3Q96KP6 325 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 TNMDQ9H2S6 317 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 CRTAC1Q9NQ79 661 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 CFAP97Q9P2B7 532 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 CGNQ9P2M7 1197 aaKnown RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 EVLQ9UI08 416 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-203ENST00000537194 UBE4BO95155 1302 aa9.51□□□□□ -0.89
SMAD3-203ENST00000537194 E2F8A0AVK6 867 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 K7EQS6 105 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 TNFRSF10BO14763 440 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 AP5Z1O43299 807 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 HCRTO43612 131 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CYP17A1P05093 508 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CFIP05156 583 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 ATICP31939 592 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 HOXD12P35452 270 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CYP2J2P51589 502 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 AP3M2P53677 418 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 WNT7BP56706 349 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 IRX4P78413 519 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 BIRC3Q13489 604 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 SLC39A14Q15043 492 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 FAM26FQ5R3K3 315 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 HECTD3Q5T447 861 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 LYSMD4Q5XG99 296 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 UNQ6494/PRO21346Q6UXR6 183 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CBWD2Q8IUF1 395 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 SYT12Q8IV01 421 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 ALLCQ8N6M5 410 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms