RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SLC46A2Q9BY10 475 aa23.11■■□□□ 1.29
SSPN-204ENST00000535504 SMOC2Q9H3U7 446 aa23.11■■□□□ 1.29
SSPN-204ENST00000535504 TDP1Q9NUW8 608 aa23.11■■□□□ 1.29
SSPN-204ENST00000535504 APEX2Q9UBZ4 518 aa23.11■■□□□ 1.29
SSPN-204ENST00000535504 CA14Q9ULX7 337 aa23.11■■□□□ 1.29
SSPN-204ENST00000535504 HDCP19113 662 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 FCARP24071 287 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 USP46P62068 366 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 ARHGAP29Q52LW3 1261 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 VITQ6UXI7 678 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 TMEM150AQ86TG1 271 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 ARHGEF19Q8IW93 802 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 ANKRD52Q8NB46 1076 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 RBBP8NLQ8NC74 664 aaPredicted RBP23.1■■□□□ 1.29
SSPN-204ENST00000535504 ARHGEF3Q9NR81 526 aa23.1■■□□□ 1.29
SSPN-204ENST00000535504 TLR8Q9NR97 1041 aaKnown RBP23.1■■□□□ 1.29
SSPN-204ENST00000535504 NUP210Q8TEM1 1887 aaPredicted RBP23.1■■□□□ 1.29
SSPN-204ENST00000535504 BECN2A8MW95 431 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 MED7O43513 233 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 ACO1P21399 889 aaKnown RBP23.09■■□□□ 1.29
SSPN-204ENST00000535504 USP8P40818 1118 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 TPM4P67936 248 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 ZNF268Q14587 947 aaPredicted RBP23.09■■□□□ 1.29
SSPN-204ENST00000535504 GOLGA7BQ2TAP0 167 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 ANO6Q4KMQ2 910 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 TADA2BQ86TJ2 420 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 TTC16Q8NEE8 873 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 ASIC4Q96FT7 647 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 TAB2Q9NYJ8 693 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 TSPAN16Q9UKR8 245 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 HCN4Q9Y3Q4 1203 aa23.09■■□□□ 1.29
SSPN-204ENST00000535504 NCANO14594 1321 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 GREB1Q4ZG55 1949 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 ZNF840PA6NDX5 716 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 TADA3O75528 432 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 PRKCQQ04759 706 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 BST2Q10589 180 aaKnown RBP23.08■■□□□ 1.29
SSPN-204ENST00000535504 SMYD5Q6GMV2 418 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 PHLDB3Q6NSJ2 640 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 HFE2Q6ZVN8 426 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 DDX42Q86XP3 938 aaKnown RBP eCLIP23.08■■□□□ 1.29
SSPN-204ENST00000535504 FBXL6Q8N531 539 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 FLCNQ8NFG4 579 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 SCAMP5Q8TAC9 235 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 PLA2G2FQ9BZM2 168 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 UBXN6Q9BZV1 441 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 LRRC4Q9HBW1 653 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 FANCLQ9NW38 375 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 TECTAO75443 2155 aa23.08■■□□□ 1.29
SSPN-204ENST00000535504 DENND4CQ5VZ89 1909 aa23.08■■□□□ 1.28
SSPN-204ENST00000535504 NRG2O14511 850 aaPredicted RBP23.07■■□□□ 1.28
SSPN-204ENST00000535504 CHADO15335 359 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 BEST1O76090 585 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 SETSIPP0DME0 302 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 SLC9A1P19634 815 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 PON1P27169 355 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 PSEN1P49768 467 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 MLF2Q15773 248 aaPredicted RBP23.07■■□□□ 1.28
SSPN-204ENST00000535504 ARHGAP44Q17R89 818 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 HECTD3Q5T447 861 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 GPIHBP1Q8IV16 184 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 ARHGAP18Q8N392 663 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 UBR7Q8N806 425 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 ARL14EPQ8N8R7 260 aaPredicted RBP23.07■■□□□ 1.28
SSPN-204ENST00000535504 ZMIZ2Q8NF64 920 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 KAT5Q92993 513 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 TMEM30AQ9NV96 361 aa23.07■■□□□ 1.28
SSPN-204ENST00000535504 MRPS17Q9Y2R5 130 aaKnown RBP23.07■■□□□ 1.28
SSPN-204ENST00000535504 TNFRSF10BO14763 440 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 MBL2P11226 248 aaPredicted RBP23.06■■□□□ 1.28
SSPN-204ENST00000535504 GOLGA8FQ08AF8 430 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 GOLGA8DPQ0D2H9 430 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 SLC44A4Q53GD3 710 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 CDKAL1Q5VV42 579 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 C1orf228Q6PIY5 440 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 AOPEPQ8N6M6 819 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 PCMTD1Q96MG8 357 aaPredicted RBP23.06■■□□□ 1.28
SSPN-204ENST00000535504 CDK5RAP1Q96SZ6 601 aaKnown RBP23.06■■□□□ 1.28
SSPN-204ENST00000535504 BPIFA3Q9BQP9 254 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 SMG9Q9H0W8 520 aaKnown RBP23.06■■□□□ 1.28
SSPN-204ENST00000535504 VPS16Q9H269 839 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 C11orf16Q9NQ32 467 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 IL37Q9NZH6 218 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 SCML2Q9UQR0 700 aa23.06■■□□□ 1.28
SSPN-204ENST00000535504 OBSL1O75147 1896 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 C2orf78A6NCI8 922 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 M0QYV0 167 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 XPO1O14980 1071 aaKnown RBP23.05■■□□□ 1.28
SSPN-204ENST00000535504 PRAMEF12O95522 483 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 RALAP11233 206 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 TUBP50607 506 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 KPNA1P52294 538 aaPredicted RBP23.05■■□□□ 1.28
SSPN-204ENST00000535504 FCHO2Q0JRZ9 810 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 KRT31Q15323 416 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 MIIPQ5JXC2 388 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 SIX6OS1Q8N1H7 587 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 USP13Q92995 863 aaPredicted RBP23.05■■□□□ 1.28
SSPN-204ENST00000535504 MSANTD3Q96H12 275 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 KREMEN1Q96MU8 473 aa23.05■■□□□ 1.28
SSPN-204ENST00000535504 TRPV5Q9NQA5 729 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms