RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ACVR2BQ13705 512 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 UAP1Q16222 522 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ASIC2Q16515 512 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ZFYVE27Q5T4F4 411 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 DCAF12L1Q5VU92 463 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 IFNL1Q8IU54 200 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 SLC25A41Q8N5S1 370 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ACO2Q99798 780 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ASB3Q9Y575 518 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 SSU72P8A0A1W2PR75 194 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 GTPBP10A4D1E9 387 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 TMEM247A6NEH6 219 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PGRMC1O00264 195 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 O00370 1275 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 NOP56O00567 594 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 LYNP07948 512 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 CCDC166P0CW27 439 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PROZP22891 400 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 SERPINB6P35237 376 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PRKCIP41743 596 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 NAMPTP43490 491 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 FAM110CQ1W6H9 321 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 RAVER1Q8IY67 606 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 LRRC57Q8N9N7 239 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 SLC7A3Q8WY07 619 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PTPRN2Q92932 1015 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 OSBPL10Q9BXB5 764 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 RXFP1Q9HBX9 757 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 METTL14Q9HCE5 456 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 CACNG4Q9UBN1 327 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 HES2Q9Y543 173 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 NME7Q9Y5B8 376 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 COMMD3-BMI1R4GMX3 469 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 A0A0J9YVX5 310 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 C5orf60A6NFR6 353 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 K7ERI5 159 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ITGA4P13612 1032 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ABCB4P21439 1286 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ARL1P40616 181 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 MARCKSL1P49006 195 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 NEK3P51956 506 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 ARPC4P59998 168 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PPP1R21Q6ZMI0 780 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PLPPR4Q7Z2D5 763 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 SATL1Q86VE3 508 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 CD302Q8IX05 232 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 MCPH1Q8NEM0 835 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 STK33Q9BYT3 514 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 DENND2DQ9H6A0 471 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 PCDH18Q9HCL0 1135 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 NDE1Q9NXR1 346 aa9.44□□□□□ -0.9
SF3B2-216ENST00000534765 AGO2Q9UKV8 859 aaKnown RBP9.44□□□□□ -0.9
SF3B2-216ENST00000534765 TRIM64CA6NLI5 447 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 LMNAP02545 664 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 MYCLP1P12525 358 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 OXCT1P55809 520 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 FMO1Q01740 532 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 ZNF211Q13398 564 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 MED21Q13503 144 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SGSM1Q2NKQ1 1148 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 KHDC1Q4VXA5 237 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 BRDTQ58F21 947 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 FOXB2Q5VYV0 432 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 MARK2Q7KZI7 788 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 ZDHHC14Q8IZN3 488 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SLC7A5P1Q8MH63 180 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PPM1KQ8N3J5 372 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SYN2Q92777 582 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 FNBP1Q96RU3 617 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 MTMR12Q9C0I1 747 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 COQ4Q9Y3A0 265 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 HCRTO43612 131 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 KDM1AO60341 852 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 MXI1P50539 228 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 GALCP54803 685 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 EIF3BP55884 814 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PPIDQ08752 370 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 DCTN2Q13561 401 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 ZNF662Q6ZS27 426 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 RGS9BPQ6ZS82 235 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PLEKHH3Q7Z736 793 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PATL1Q86TB9 770 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 PPTC7Q8NI37 304 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 SRPK1Q96SB4 655 aaKnown RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 LRRC4CQ9HCJ2 640 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 TJP2Q9UDY2 1190 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 HMGXB4Q9UGU5 601 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 TMEM98Q9Y2Y6 226 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 MYO15AQ9UKN7 3530 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 UNCXA6NJT0 531 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-216ENST00000534765 HOXC6P09630 235 aa9.43□□□□□ -0.9
SF3B2-216ENST00000534765 KRT15P19012 456 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms