RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 SH3TC2Q8TF17 1288 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 ABCF3Q9NUQ8 709 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-206ENST00000534320 RCCD1A6NED2 376 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 NVLO15381 856 aaKnown RBP17.88■□□□□ 0.45
PHRF1-206ENST00000534320 GLRA2P23416 452 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 SPRP35270 261 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-206ENST00000534320 SERPINB10P48595 397 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 MORF4L2Q15014 288 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 MGAT5BQ3V5L5 792 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 FAM161BQ96MY7 647 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 PTPRN2Q92932 1015 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 CAND2O75155 1236 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 ZNF662Q6ZS27 426 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 RGS9BPQ6ZS82 235 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 APLFQ8IW19 511 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-206ENST00000534320 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-206ENST00000534320 IRF6O14896 467 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 FDFT1P37268 417 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 NDST1P52848 882 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 SNX17Q15036 470 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 PPP1R2P1Q96PQ5 205 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 C20orf96Q9NUD7 363 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-206ENST00000534320 YDJCA8MPS7 323 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 LACTBL1A8MY62 500 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 TGFB1I1O43294 461 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 PTGER2P43116 358 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 PPIL2Q13356 520 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 USP10Q14694 798 aaKnown RBP17.87■□□□□ 0.45
PHRF1-206ENST00000534320 TAS2R42Q7RTR8 314 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 FBXO36Q8NEA4 188 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 NKX2-3Q8TAU0 364 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 ZNF512Q96ME7 567 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-206ENST00000534320 DACH2Q96NX9 599 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 STX18Q9P2W9 335 aaKnown RBP17.87■□□□□ 0.45
PHRF1-206ENST00000534320 ARHGDIAP52565 204 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 ITGB3BPQ13352 177 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-206ENST00000534320 USP50Q70EL3 339 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-206ENST00000534320 TRPM8Q7Z2W7 1104 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 TSPAN16Q9UKR8 245 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 SPEF2Q9C093 1822 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 TRIM66O15016 1216 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 ACTL9Q8TC94 416 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 ASIC4Q96FT7 647 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 TAS2R14Q9NYV8 317 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 PLIN4Q96Q06 1357 aa17.87■□□□□ 0.45
PHRF1-206ENST00000534320 BST2Q10589 180 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 SLC27A1Q6PCB7 646 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 CATSPER1Q8NEC5 780 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ABI2Q9NYB9 513 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ARHGAP26Q9UNA1 814 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 COPG1Q9Y678 874 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 IGKV6D-41A0A0C4DH26 115 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 A0A1B0GW55 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 EIF4E1BA6NMX2 242 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 UPP2O95045 317 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 THP07101 528 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4L2P0CJ85 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4L3P0CJ86 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4L4P0CJ87 422 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4L5P0CJ88 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4L6P0CJ89 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4L7P0CJ90 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 MRPS35P82673 323 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 CCDC15Q0P6D6 951 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ZNF268Q14587 947 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 NPY5RQ15761 445 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 SLFN11Q7Z7L1 901 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 IPMKQ8NFU5 416 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 AENQ8WTP8 325 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ZBTB18Q99592 522 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 C10orf88Q9H8K7 445 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 CHCHD3Q9NX63 227 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DUX4Q9UBX2 424 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 AP4E1Q9UPM8 1137 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 RARAP10276 462 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 NNMTP40261 264 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 MARSP56192 900 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 HABP4Q5JVS0 413 aaKnown RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ACBD5Q5T8D3 534 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 NAPEPLDQ6IQ20 393 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 SH3BP5LQ7L8J4 393 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 DNAJB3Q8WWF6 145 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ZNF669Q96BR6 464 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 RMDN2Q96LZ7 410 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 TRIM49D1C9J1S8 452 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 PDE2AO00408 941 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 YY1P25490 414 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 PCSK7Q16549 785 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 ACCSLQ4AC99 568 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 LNX1Q8TBB1 728 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-206ENST00000534320 GDF3Q9NR23 364 aa17.86■□□□□ 0.45
PHRF1-206ENST00000534320 SPATA31C2B4DYI2 1134 aa17.85■□□□□ 0.45
PHRF1-206ENST00000534320 RNF225M0QZC1 329 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-206ENST00000534320 LGALS2P05162 132 aa17.85■□□□□ 0.45
PHRF1-206ENST00000534320 ADCYAP1R1P41586 468 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms