RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CDR1P51861 262 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 MCCD1P59942 119 aaPredicted RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 FKBP3Q00688 224 aaKnown RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 LRRC63Q05C16 580 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 HNRNPDQ14103 355 aaKnown RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 VEPH1Q14D04 833 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 SGSM1Q2NKQ1 1148 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 ZNF699Q32M78 642 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 ZACNQ401N2 412 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 ZNF667Q5HYK9 610 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 C1orf220Q5T0J3 134 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 ISM2Q6H9L7 571 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 VITQ6UXI7 678 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 SV2AQ7L0J3 742 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 DNAJB7Q7Z6W7 309 aaPredicted RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 TTC9BQ8N6N2 239 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 TAF4BQ92750 862 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 PSMG2Q969U7 264 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 DHTKD1Q96HY7 919 aaPredicted RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 PKMYT1Q99640 499 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 DNAJC25Q9H1X3 360 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 SNX25Q9H3E2 840 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 ABCB6Q9NP58 842 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 TMLHEQ9NVH6 421 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 ABI2Q9NYB9 513 aaPredicted RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 CDH9Q9ULB4 789 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 LNP1A1A4G5 178 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 UPK3BL1B0FP48 263 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 UPK3BL2E5RIL1 263 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 ARNTLO00327 626 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 PSMA7O14818 248 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 HCRTO43612 131 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 HYAL3O43820 417 aaPredicted RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 SOAT2O75908 522 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CLSTN1O94985 981 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 FGF19O95750 216 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 EPB41P11171 864 aaKnown RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 P4HA1P13674 534 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CEBPBP17676 345 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 ATF6P18850 670 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 GNL1P36915 607 aaPredicted RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CCR2P41597 374 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CREB5Q02930 508 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 LMAN2Q12907 356 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CCINQ13939 588 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 MORC3Q14149 939 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 MAPRE1Q15691 268 aaKnown RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 TAF12Q16514 161 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CFAP221Q4G0U5 840 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 ANKRD40Q6AI12 368 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 FAM171BQ6P995 826 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 C19orf48Q6RUI8 117 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 C4orf50Q6ZRC1 276 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 CLEC17AQ6ZS10 378 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 SPATA2LQ8IUW3 424 aaPredicted RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 OR6B3Q8NGW1 331 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 TCEAL4Q96EI5 215 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 EEF2KMTQ96G04 330 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 FUBP3Q96I24 572 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 SYT15Q9BQS2 421 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 MRPL45Q9BRJ2 306 aaKnown RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 PI4K2AQ9BTU6 479 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 LRRC3Q9BY71 257 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 SMOC1Q9H4F8 434 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 RBM12Q9NTZ6 932 aaKnown RBP10.85□□□□□ -0.67
CHMP4A-206ENST00000533011 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 SPECC1L-ADORA2AF8WAN1 911 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 SLC16A3O15427 465 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 STX10O60499 249 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 ATP2C2O75185 946 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 MOSPD3O75425 235 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 ASS1P00966 412 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 HLA-DRAP01903 254 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 PDGFRBP09619 1106 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 BMP6P22004 513 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 CYP2F1P24903 491 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 GTF2H1P32780 548 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 PIK3CAP42336 1068 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 GCLMP48507 274 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 PMS1P54277 932 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 PSMC1P62191 440 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 RPL10AP62906 217 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 PPP3CAQ08209 521 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 FCHO2Q0JRZ9 810 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 CAMK4Q16566 473 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 FOXR2Q6PJQ5 311 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 Q6ZS52 159 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 TMC8Q8IU68 726 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 TRIML1Q8N9V2 468 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 MYCBPAPQ8TBZ2 947 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
CHMP4A-206ENST00000533011 GIPC2Q8TF65 315 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms