RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 LEFTY2O00292 366 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 KHNYNO15037 678 aaKnown RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 HUS1O60921 280 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 ADAM23O75077 832 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 HDCP19113 662 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 CSRP1P21291 193 aaKnown RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 LONP1P36776 959 aaKnown RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 P2RY2P41231 377 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 MAGEA11P43364 429 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 KIR2DL1P43626 348 aaPredicted RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 EMC10Q5UCC4 262 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 ARMCX6Q7L4S7 300 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 FILIP1Q7Z7B0 1213 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 PROSER1Q86XN7 944 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 SCN4BQ8IWT1 228 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 ADGRF2Q8IZF7 708 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM86AQ8N2M4 240 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 PHTF2Q8N3S3 785 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 ALLCQ8N6M5 410 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 TOP6BLQ8N6T0 577 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 IL17RCQ8NAC3 791 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 DEFB124Q8NES8 71 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 MYLPFQ96A32 169 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 SYAP1Q96A49 352 aaPredicted RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 HVCN1Q96D96 273 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 FUBP3Q96I24 572 aaKnown RBP eCLIP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 FSCN3Q9NQT6 498 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 CACNA2D2Q9NY47 1150 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 RBAKQ9NYW8 714 aaPredicted RBP9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 ITGA11Q9UKX5 1188 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 NEUROG3Q9Y4Z2 214 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 KNL1Q8NG31 2342 aa9.84□□□□□ -0.83
CHMP4A-205ENST00000531158 CKAP5Q14008 2032 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 A0A087X0B3 334 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ZNF840PA6NDX5 716 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 HYAL3O43820 417 aaPredicted RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 CEACAM1P13688 526 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ABCD1P33897 745 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 HOXD13P35453 343 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 DHPSP49366 369 aaPredicted RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 MYL7Q01449 175 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 KCNB1Q14721 858 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 MAP7D1Q3KQU3 841 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ZSCAN23Q3MJ62 389 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 USP39Q53GS9 565 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 DAB2IPQ5VWQ8 1189 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 LARP1BQ659C4 914 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 RHBDF2Q6PJF5 856 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 CYP2U1Q7Z449 544 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 GAS2L3Q86XJ1 694 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 SPATA2LQ8IUW3 424 aaPredicted RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 TMEFF1Q8IYR6 380 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ADGRG2Q8IZP9 1017 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 CSGALNACT2Q8N6G5 542 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 TXNDC5Q8NBS9 432 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 PIGKQ92643 395 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ANP32BQ92688 251 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 PCED1BQ96HM7 432 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 SPATA17Q96L03 361 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 PPP1R9BQ96SB3 815 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 SYT15Q9BQS2 421 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 TTLL2Q9BWV7 592 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 MRPL44Q9H9J2 332 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 EVLQ9UI08 416 aaPredicted RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 FBXO2Q9UK22 296 aaPredicted RBP9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 KLK13Q9UKR3 277 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 MSRB2Q9Y3D2 182 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 ATP6V1DQ9Y5K8 247 aa9.83□□□□□ -0.84
CHMP4A-205ENST00000531158 A0A0A0MRY4 1105 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 SPAARA0A1B0GVQ0 90 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 FRMD3A2A2Y4 597 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 KLF8O95600 359 aaPredicted RBP9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 NFATC1O95644 943 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 OAS1P00973 400 aaKnown RBP9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 CAPNS1P04632 268 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 KRT19P08727 400 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 ENGP17813 658 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 BDNFP23560 247 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 NASPP49321 788 aaPredicted RBP9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 FAM193AP78312 1265 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 SLC7A9P82251 487 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 POSTNQ15063 836 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 DHCR24Q15392 516 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 UAP1L1Q3KQV9 507 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 TRIM61Q5EBN2 209 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 PEAR1Q5VY43 1037 aaPredicted RBP9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 CAVIN1Q6NZI2 390 aaKnown RBP9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 PIP4P1Q86T03 277 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 MIB1Q86YT6 1006 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 SPATA18Q8TC71 538 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 HPS3Q969F9 1004 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 WBP2Q969T9 261 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 ZFRQ96KR1 1074 aaKnown RBP9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 CLIC6Q96NY7 704 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 MRPL45Q9BRJ2 306 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms