RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RAB34Q9BZG1 259 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 ARMC7Q9H6L4 198 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 GCNT4Q9P109 453 aa8.46□□□□□ -1.05
CSDE1-214ENST00000530886 PTBP2Q9UKA9 531 aaKnown RBP8.46□□□□□ -1.05
CSDE1-214ENST00000530886 SCN4AP35499 1836 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 STRCP1A6NGW2 1772 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 SDR42E2A6NKP2 422 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 PDXKO00764 312 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 IDH3BO43837 385 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 CCNT1O60563 726 aaKnown RBP8.46□□□□□ -1.06
CSDE1-214ENST00000530886 APOEP02649 317 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 DLATP10515 647 aaKnown RBP8.46□□□□□ -1.06
CSDE1-214ENST00000530886 CHRNB1P11230 501 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 UBL4AP11441 157 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 TSHRP16473 764 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 TNFAIP3P21580 790 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 TTKP33981 857 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-214ENST00000530886 CTAG1AP78358 180 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 SLC18A2Q05940 514 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 BMT2Q1RMZ1 405 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 SBK1Q52WX2 424 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 HP1BP3Q5SSJ5 553 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-214ENST00000530886 EGFLAMQ63HQ2 1017 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 SIGIRRQ6IA17 410 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 TOM1L2Q6ZVM7 507 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 CARM1Q86X55 608 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 FBXW8Q8N3Y1 598 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 USP6NLQ92738 828 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 EGLN2Q96KS0 407 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 CNBD2Q96M20 576 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 MOV10Q9HCE1 1003 aaKnown RBP8.46□□□□□ -1.06
CSDE1-214ENST00000530886 GNEQ9Y223 722 aaKnown RBP8.46□□□□□ -1.06
CSDE1-214ENST00000530886 SCINQ9Y6U3 715 aa8.46□□□□□ -1.06
CSDE1-214ENST00000530886 SPOPO43791 374 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CYP1A2P05177 515 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 DCKP27707 260 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CIITAP33076 1130 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 DYNLL1P63167 89 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 LSM12Q3MHD2 195 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 BTBD8Q5XKL5 378 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 GJB7Q6PEY0 223 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 SH2D5Q6ZV89 423 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ELMOD1Q8N336 334 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 TRIML2Q8N7C3 387 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 POU5F2Q8N7G0 328 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 RPGRQ92834 1020 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 AGPAT1Q99943 283 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 HERPUD2Q9BSE4 406 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 LIN28AQ9H9Z2 209 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CHST7Q9NS84 486 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 COL5A3P25940 1745 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF536O15090 1300 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 NOTOA8MTQ0 251 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 FAM155AB1AL88 458 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 MTRF1O75570 445 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 KCNA2P16389 499 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 KDSRQ06136 332 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 PTP4A2Q12974 167 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 OASLQ15646 514 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 IYDQ6PHW0 289 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 KRT27Q7Z3Y8 459 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ESX1Q8N693 406 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF713Q8N859 430 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 LMO3Q8TAP4 145 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 C1orf54Q8WWF1 131 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 HSPH1Q92598 858 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 TMIGD2Q96BF3 282 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 C12orf43Q96C57 262 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 TMA16Q96EY4 203 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 APOPT1Q96IL0 206 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 PWWP2AQ96N64 755 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CDH19Q9H159 772 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 RIC8BQ9NVN3 520 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 SLC17A7Q9P2U7 560 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 PPARGC1AQ9UBK2 798 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 MYO3BQ8WXR4 1341 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 MINDY4BA8MYZ0 360 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CALUO43852 315 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 SNAP91O60641 907 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A9O60656 530 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 KLHL2O95198 593 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 GZMAP12544 262 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A6P19224 532 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A1P22309 533 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A4P22310 534 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 JAK1P23458 1154 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 GABRB3P28472 473 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A3P35503 534 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 UGT1A5P35504 534 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 WASHC5Q12768 1159 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-214ENST00000530886 GK3PQ14409 553 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 RABGAP1LQ5R372 815 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 CPNE8Q86YQ8 564 aa8.45□□□□□ -1.06
CSDE1-214ENST00000530886 ANKMY2Q8IV38 441 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms