RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 PCED1AQ9H1Q7 454 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 PARVGQ9HBI0 331 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 ARHGEF4Q9NR80 690 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 DPP3Q9NY33 737 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 CALCOCO1Q9P1Z2 691 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 MBD1Q9UIS9 605 aaPredicted RBP6.01□□□□□ -1.45
CTSB-216ENST00000530290 STARD13Q9Y3M8 1113 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 KALRNO60229 2985 aa6.01□□□□□ -1.45
CTSB-216ENST00000530290 ATXN2Q99700 1313 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 AHCTF1Q8WYP5 2266 aa6□□□□□ -1.45
CTSB-216ENST00000530290 COL5A1P20908 1838 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 IGHV1OR15-9A0A0B4J2B8 117 aa6□□□□□ -1.45
CTSB-216ENST00000530290 A0A1B0GTW7 788 aa6□□□□□ -1.45
CTSB-216ENST00000530290 TEX51A0A1B0GUA7 166 aa6□□□□□ -1.45
CTSB-216ENST00000530290 E2F8A0AVK6 867 aa6□□□□□ -1.45
CTSB-216ENST00000530290 E9PMD0 336 aa6□□□□□ -1.45
CTSB-216ENST00000530290 K7ENM7 598 aa6□□□□□ -1.45
CTSB-216ENST00000530290 LEFTY2O00292 366 aa6□□□□□ -1.45
CTSB-216ENST00000530290 PPEF2O14830 753 aa6□□□□□ -1.45
CTSB-216ENST00000530290 SH3BP5O60239 455 aa6□□□□□ -1.45
CTSB-216ENST00000530290 CBFA2T3O75081 653 aa6□□□□□ -1.45
CTSB-216ENST00000530290 NDUFS2O75306 463 aa6□□□□□ -1.45
CTSB-216ENST00000530290 CHRM1P11229 460 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 HOXB2P14652 356 aa6□□□□□ -1.45
CTSB-216ENST00000530290 NTSR1P30989 418 aa6□□□□□ -1.45
CTSB-216ENST00000530290 TIE1P35590 1138 aa6□□□□□ -1.45
CTSB-216ENST00000530290 TNFSF9P41273 254 aa6□□□□□ -1.45
CTSB-216ENST00000530290 TUBP50607 506 aa6□□□□□ -1.45
CTSB-216ENST00000530290 GUCY2FP51841 1108 aa6□□□□□ -1.45
CTSB-216ENST00000530290 ZNF131P52739 623 aa6□□□□□ -1.45
CTSB-216ENST00000530290 NOP14P78316 857 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 SPAG1Q07617 926 aa6□□□□□ -1.45
CTSB-216ENST00000530290 GRIK2Q13002 908 aa6□□□□□ -1.45
CTSB-216ENST00000530290 SUZ12Q15022 739 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 ZNF174Q15697 407 aa6□□□□□ -1.45
CTSB-216ENST00000530290 GAB4Q2WGN9 574 aa6□□□□□ -1.45
CTSB-216ENST00000530290 SEZ6Q53EL9 994 aa6□□□□□ -1.45
CTSB-216ENST00000530290 NAIF1Q69YI7 327 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 DTHD1Q6ZMT9 781 aa6□□□□□ -1.45
CTSB-216ENST00000530290 DENND5BQ6ZUT9 1274 aa6□□□□□ -1.45
CTSB-216ENST00000530290 METTL3Q86U44 580 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 LRRTM3Q86VH5 581 aa6□□□□□ -1.45
CTSB-216ENST00000530290 PDCL2Q8N4E4 241 aa6□□□□□ -1.45
CTSB-216ENST00000530290 CCDC33Q8N5R6 958 aa6□□□□□ -1.45
CTSB-216ENST00000530290 ZNF513Q8N8E2 541 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 ARL14EPQ8N8R7 260 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 KRI1Q8N9T8 703 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 TRIML1Q8N9V2 468 aa6□□□□□ -1.45
CTSB-216ENST00000530290 TERB1Q8NA31 727 aa6□□□□□ -1.45
CTSB-216ENST00000530290 STKLD1Q8NE28 680 aa6□□□□□ -1.45
CTSB-216ENST00000530290 CADM4Q8NFZ8 388 aa6□□□□□ -1.45
CTSB-216ENST00000530290 BAHD1Q8TBE0 780 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 CACTINQ8WUQ7 758 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 RLN3Q8WXF3 142 aa6□□□□□ -1.45
CTSB-216ENST00000530290 DNASE2BQ8WZ79 361 aa6□□□□□ -1.45
CTSB-216ENST00000530290 OVCA2Q8WZ82 227 aa6□□□□□ -1.45
CTSB-216ENST00000530290 SLC39A7Q92504 469 aa6□□□□□ -1.45
CTSB-216ENST00000530290 ZNF419Q96HQ0 510 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 LRIG1Q96JA1 1093 aa6□□□□□ -1.45
CTSB-216ENST00000530290 HSPA12BQ96MM6 686 aa6□□□□□ -1.45
CTSB-216ENST00000530290 SLITRK1Q96PX8 696 aa6□□□□□ -1.45
CTSB-216ENST00000530290 PKMYT1Q99640 499 aa6□□□□□ -1.45
CTSB-216ENST00000530290 LLPHQ9BRT6 129 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 ST6GALNAC4Q9H4F1 302 aa6□□□□□ -1.45
CTSB-216ENST00000530290 POLR3BQ9NW08 1133 aaPredicted RBP6□□□□□ -1.45
CTSB-216ENST00000530290 GDAP2Q9NXN4 497 aa6□□□□□ -1.45
CTSB-216ENST00000530290 DDX43Q9NXZ2 648 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 DEC1Q9P2X7 70 aa6□□□□□ -1.45
CTSB-216ENST00000530290 ITGA11Q9UKX5 1188 aa6□□□□□ -1.45
CTSB-216ENST00000530290 PCOLCE2Q9UKZ9 415 aa6□□□□□ -1.45
CTSB-216ENST00000530290 INVSQ9Y283 1065 aa6□□□□□ -1.45
CTSB-216ENST00000530290 RAXQ9Y2V3 346 aa6□□□□□ -1.45
CTSB-216ENST00000530290 R3HCC1Q9Y3T6 440 aaKnown RBP6□□□□□ -1.45
CTSB-216ENST00000530290 PCDHB6Q9Y5E3 794 aa6□□□□□ -1.45
CTSB-216ENST00000530290 STYXL1Q9Y6J8 313 aa6□□□□□ -1.45
CTSB-216ENST00000530290 TBC1D3BA6NDS4 549 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 MEI4A8MW99 385 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 GABRDO14764 452 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 KIAA0391O15091 583 aaKnown RBP5.99□□□□□ -1.45
CTSB-216ENST00000530290 ADAM23O75077 832 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 TBCAO75347 108 aaKnown RBP5.99□□□□□ -1.45
CTSB-216ENST00000530290 FAM13AO94988 1023 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 LDHAP00338 332 aaKnown RBP5.99□□□□□ -1.45
CTSB-216ENST00000530290 OAS1P00973 400 aaKnown RBP5.99□□□□□ -1.45
CTSB-216ENST00000530290 PLA2G4BP0C869 781 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 HNRNPLP14866 589 aaKnown RBP eCLIP5.99□□□□□ -1.45
CTSB-216ENST00000530290 GABRG2P18507 467 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 CYP2F1P24903 491 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 OXTRP30559 389 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 HNF1BP35680 557 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 MATKP42679 507 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 SLC12A3P55017 1021 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 FAM193AP78312 1265 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 ATP2C1P98194 919 aaPredicted RBP5.99□□□□□ -1.45
CTSB-216ENST00000530290 STARD3Q14849 445 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 DDR2Q16832 855 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 ARL6IP4Q66PJ3 421 aaKnown RBP5.99□□□□□ -1.45
CTSB-216ENST00000530290 ADALQ6DHV7 355 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 FAM171BQ6P995 826 aa5.99□□□□□ -1.45
CTSB-216ENST00000530290 LRRC69Q6ZNQ3 347 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms