RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ASB7Q9H672 318 aa12.46□□□□□ -0.41
SDCBP-211ENST00000523441 CAPN10Q9HC96 672 aa12.46□□□□□ -0.41
SDCBP-211ENST00000523441 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
SDCBP-211ENST00000523441 DERAQ9Y315 318 aa12.46□□□□□ -0.41
SDCBP-211ENST00000523441 C2CD2Q9Y426 696 aa12.46□□□□□ -0.41
SDCBP-211ENST00000523441 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
SDCBP-211ENST00000523441 FLNBO75369 2602 aaKnown RBP12.46□□□□□ -0.42
SDCBP-211ENST00000523441 CELSR3Q9NYQ7 3312 aa12.46□□□□□ -0.42
SDCBP-211ENST00000523441 UPK3BL1B0FP48 263 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 UPK3BL2E5RIL1 263 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 ABCB7O75027 752 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 NDUFS2O75306 463 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
SDCBP-211ENST00000523441 PDGFRBP09619 1106 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 IRF1P10914 325 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 MBL2P11226 248 aaPredicted RBP12.45□□□□□ -0.42
SDCBP-211ENST00000523441 HOXB2P14652 356 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 DPP6P42658 865 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 WNT7BP56706 349 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 ANO4Q32M45 955 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 RHBDF2Q6PJF5 856 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 CCNI2Q6ZMN8 369 aaPredicted RBP12.45□□□□□ -0.42
SDCBP-211ENST00000523441 SLCO6A1Q86UG4 719 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 ADGRF2Q8IZF7 708 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 ADGRG2Q8IZP9 1017 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 CSGALNACT2Q8N6G5 542 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 ZSWIM2Q8NEG5 633 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 MYRFLQ96LU7 910 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 ACBD6Q9BR61 282 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 FAM213AQ9BRX8 229 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 MIR1-1HGQ9H1L0 117 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 PARVGQ9HBI0 331 aa12.45□□□□□ -0.42
SDCBP-211ENST00000523441 IGHV1OR15-9A0A0B4J2B8 117 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 FAM149AA5PLN7 773 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 FAM221BA6H8Z2 402 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 TRIM24O15164 1050 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
SDCBP-211ENST00000523441 ADH1CP00326 375 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 PIGRP01833 764 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 ANXA13P27216 316 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 GRIA2P42262 883 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
SDCBP-211ENST00000523441 MCM6Q14566 821 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 KIAA1324Q6UXG2 1013 aaKnown RBP12.44□□□□□ -0.42
SDCBP-211ENST00000523441 SLC36A4Q6YBV0 504 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 ADAM32Q8TC27 787 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 ADAMTS14Q8WXS8 1223 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 MYLPFQ96A32 169 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 SYT15Q9BQS2 421 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 MAGEC2Q9UBF1 373 aaPredicted RBP12.44□□□□□ -0.42
SDCBP-211ENST00000523441 APOBEC2Q9Y235 224 aaKnown RBP12.44□□□□□ -0.42
SDCBP-211ENST00000523441 RAD54BQ9Y620 910 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 ACACAQ13085 2346 aa12.44□□□□□ -0.42
SDCBP-211ENST00000523441 LMO2P25791 158 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 PNPLA4P41247 253 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 PDE6CP51160 858 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 ANAPC15P60006 121 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 CYP4F3Q08477 520 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 PEAR1Q5VY43 1037 aaPredicted RBP12.43□□□□□ -0.42
SDCBP-211ENST00000523441 BTBD8Q5XKL5 378 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 CRELD2Q6UXH1 353 aaPredicted RBP12.43□□□□□ -0.42
SDCBP-211ENST00000523441 DENND5BQ6ZUT9 1274 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 HS2ST1Q7LGA3 356 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 PIP4K2CQ8TBX8 421 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
SDCBP-211ENST00000523441 ACOX2Q99424 681 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 PKMYT1Q99640 499 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 IL21RQ9HBE5 538 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 ABCB6Q9NP58 842 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 DNAAF2Q9NVR5 837 aaKnown RBP12.43□□□□□ -0.42
SDCBP-211ENST00000523441 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 ODF2LQ9ULJ1 636 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 HELZ2Q9BYK8 2649 aaKnown RBP12.43□□□□□ -0.42
SDCBP-211ENST00000523441 APC2O95996 2303 aa12.43□□□□□ -0.42
SDCBP-211ENST00000523441 MEI4A8MW99 385 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.42□□□□□ -0.42
SDCBP-211ENST00000523441 LAD1O00515 517 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 SLC9A3R1O14745 358 aaPredicted RBP12.42□□□□□ -0.42
SDCBP-211ENST00000523441 IL18RAPO95256 599 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 NDUFV2P19404 249 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 HOXD12P35452 270 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 DDIT3P35638 169 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 PRPHP41219 470 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 TNFRSF4P43489 277 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 GRIK2Q13002 908 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 HNRNPDQ14103 355 aaKnown RBP12.42□□□□□ -0.42
SDCBP-211ENST00000523441 TMEM119Q4V9L6 283 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 SPDYCQ5MJ68 293 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 HYIQ5T013 277 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 SLFN12LQ6IEE8 588 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 C4orf50Q6ZRC1 276 aa12.42□□□□□ -0.42
SDCBP-211ENST00000523441 TOGARAM2Q6ZUX3 1019 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms