RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PNKPQ96T60 521 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 MRPL45Q9BRJ2 306 aaKnown RBP27.66■■■□□ 2.02
PVT1-219ENST00000523427 SNX25Q9H3E2 840 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 GON4LQ3T8J9 2241 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 SGK1O00141 431 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 WARSP23381 471 aaKnown RBP27.65■■■□□ 2.02
PVT1-219ENST00000523427 MRPS21P82921 87 aaKnown RBP27.65■■■□□ 2.02
PVT1-219ENST00000523427 TAF10Q12962 218 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 TRIM61Q5EBN2 209 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 KIAA1211LQ6NV74 962 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 LPCAT2Q7L5N7 544 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 C12orf40Q86WS4 652 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 PDILTQ8N807 584 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 RDH13Q8NBN7 331 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 OR6B3Q8NGW1 331 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 MYCBPAPQ8TBZ2 947 aa27.65■■■□□ 2.02
PVT1-219ENST00000523427 KIAA1549LQ6ZVL6 1849 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 TRIM66O15016 1216 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 KAT7O95251 611 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 APODP05090 189 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 MBL2P11226 248 aaPredicted RBP27.64■■■□□ 2.02
PVT1-219ENST00000523427 GNL1P36915 607 aaPredicted RBP27.64■■■□□ 2.02
PVT1-219ENST00000523427 SLC7A9P82251 487 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 RESTQ13127 1097 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 IL17RCQ8NAC3 791 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 HMGB4Q8WW32 186 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 ARHGEF4Q9NR80 690 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 EHD2Q9NZN4 543 aa27.64■■■□□ 2.02
PVT1-219ENST00000523427 A0A087X0B3 334 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 SLC9A3R1O14745 358 aaPredicted RBP27.63■■■□□ 2.01
PVT1-219ENST00000523427 DLATP10515 647 aaKnown RBP27.63■■■□□ 2.01
PVT1-219ENST00000523427 CEACAM1P13688 526 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 PTGER3P43115 390 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 SURF1Q15526 300 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 TDRD10Q5VZ19 366 aaKnown RBP27.63■■■□□ 2.01
PVT1-219ENST00000523427 RHBDF2Q6PJF5 856 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 LIMS2Q7Z4I7 341 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 CCDC65Q8IXS2 484 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 WHAMMQ8TF30 809 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 SPACA7Q96KW9 195 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 TTLL2Q9BWV7 592 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 POLMQ9NP87 494 aaPredicted RBP27.63■■■□□ 2.01
PVT1-219ENST00000523427 NME7Q9Y5B8 376 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 FAM208BQ5VWN6 2430 aa27.63■■■□□ 2.01
PVT1-219ENST00000523427 ATXN2Q99700 1313 aaKnown RBP27.63■■■□□ 2.01
PVT1-219ENST00000523427 FRMD3A2A2Y4 597 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 PFKLP17858 780 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 CSRP1P21291 193 aaKnown RBP27.62■■■□□ 2.01
PVT1-219ENST00000523427 P2RY2P41231 377 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 CACNA2D1P54289 1103 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 TRAPPC11Q7Z392 1133 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 OLIG1Q8TAK6 271 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 FNBP1Q96RU3 617 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 SCNM1Q9BWG6 230 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 NUSAP1Q9BXS6 441 aaKnown RBP27.62■■■□□ 2.01
PVT1-219ENST00000523427 ADAM33Q9BZ11 813 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 ZNF518BQ9C0D4 1074 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 DPEP3Q9H4B8 488 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 TMEM74BQ9NUR3 256 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 HSPBP1Q9NZL4 362 aa27.62■■■□□ 2.01
PVT1-219ENST00000523427 CLDN5O00501 218 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 CST3P01034 146 aaPredicted RBP27.61■■■□□ 2.01
PVT1-219ENST00000523427 ADH5P11766 374 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 TNNI1P19237 187 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 DEFB119Q8N690 84 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 NAT16Q8N8M0 369 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 C8orf48Q96LL4 319 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 SLITRK1Q96PX8 696 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 UPF2Q9HAU5 1272 aaKnown RBP27.61■■■□□ 2.01
PVT1-219ENST00000523427 FSCN3Q9NQT6 498 aa27.61■■■□□ 2.01
PVT1-219ENST00000523427 MBD1Q9UIS9 605 aaPredicted RBP27.61■■■□□ 2.01
PVT1-219ENST00000523427 HELZP42694 1942 aaKnown RBP27.61■■■□□ 2.01
PVT1-219ENST00000523427 TCRBV21S2A2A0A5A6 115 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 KIAA0391O15091 583 aaKnown RBP27.6■■■□□ 2.01
PVT1-219ENST00000523427 ADH1CP00326 375 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 PTPN1P18031 435 aaKnown RBP27.6■■■□□ 2.01
PVT1-219ENST00000523427 PPP3CCP48454 512 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 NOP14P78316 857 aaKnown RBP27.6■■■□□ 2.01
PVT1-219ENST00000523427 LMAN2Q12907 356 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 EOGTQ5NDL2 527 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 LY6G5CQ5SRR4 150 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 STXBP4Q6ZWJ1 553 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 WDR49Q8IV35 697 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 CCDC127Q96BQ5 260 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 CEP295NLQ96MC4 621 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 TMEM30AQ9NV96 361 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 WASF3Q9UPY6 502 aa27.6■■■□□ 2.01
PVT1-219ENST00000523427 CLSTN1O94985 981 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 OAS1P00973 400 aaKnown RBP27.59■■■□□ 2.01
PVT1-219ENST00000523427 CFIP05156 583 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 GRIA2P42262 883 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 TNNC1P63316 161 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 WDR72Q3MJ13 1102 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 ERLEC1Q96DZ1 483 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 CHORDC1Q9UHD1 332 aaPredicted RBP27.59■■■□□ 2.01
PVT1-219ENST00000523427 MYOFQ9NZM1 2061 aa27.59■■■□□ 2.01
PVT1-219ENST00000523427 ASCC3Q8N3C0 2202 aaKnown RBP27.59■■■□□ 2.01
PVT1-219ENST00000523427 TBC1D3BA6NDS4 549 aa27.58■■■□□ 2.01
PVT1-219ENST00000523427 TNFRSF10BO14763 440 aa27.58■■■□□ 2.01
PVT1-219ENST00000523427 OLFM2O95897 454 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms