RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 TMEM240Q5SV17 173 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CC2D1AQ6P1N0 951 aaPredicted RBP15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ANKS1BQ7Z6G8 1248 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ATAD1Q8NBU5 361 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 GPR152Q8TDT2 470 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 AP1M1Q9BXS5 423 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 DNAI2Q9GZS0 605 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ZCWPW1Q9H0M4 648 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PLEKHA4Q9H4M7 779 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 NR2E1Q9Y466 385 aa15.83■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CTAGE15A4D2H0 777 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 C2CD4BA6NLJ0 364 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 USP17L7P0C7H9 530 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CTAGE8P0CG41 777 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PDGFRAP16234 1089 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RPL34P49207 117 aaKnown RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ATXN1P54253 815 aaKnown RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SLC8A3P57103 927 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 MRPL58Q14197 206 aaKnown RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ELF2Q15723 593 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 KCNT1Q5JUK3 1230 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CTAGE6Q86UF2 777 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SPATA2LQ8IUW3 424 aaPredicted RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CTAGE4Q8IX94 777 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CEP112Q8N8E3 955 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SCAMP5Q8TAC9 235 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RNPC3Q96LT9 517 aaKnown RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ULBP1Q9BZM6 244 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 LRRC4Q9HBW1 653 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RBM12Q9NTZ6 932 aaKnown RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PCSK1NQ9UHG2 260 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PCDHA3Q9Y5H8 950 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 TCRBV7S2A1N4TA0A589 114 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 LRCH4O75427 683 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 FGGP02679 453 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 IL1R2P27930 398 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PITX1P78337 314 aaPredicted RBP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PPIGQ13427 754 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CCDC14Q49A88 953 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 UBL4BQ8N7F7 174 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SPATA18Q8TC71 538 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 AUTS2Q8WXX7 1259 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 FAM149B1Q96BN6 582 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 HSFY1Q96LI6 401 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 HERPUD2Q9BSE4 406 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 TTPALQ9BTX7 342 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CRISPLD1Q9H336 500 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ZWILCHQ9H900 591 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CALCOCO1Q9P1Z2 691 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SLC27A5Q9Y2P5 690 aa15.82■□□□□ 0.12
CSGALNACT1-211ENST00000522854 LCHNA4D1U4 455 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 MIF4GDA9UHW6 222 aaKnown RBP15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PI4K2BG5E9Z4 385 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 BAIAP3O94812 1187 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PAX3P23760 479 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 GRIK1P39086 918 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 TUBB2AQ13885 445 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 DDR2Q16832 855 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CFAP221Q4G0U5 840 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RNF19BQ6ZMZ0 732 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SPRED2Q7Z698 418 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SCN4BQ8IWT1 228 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SIX6OS1Q8N1H7 587 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SPATA4Q8NEY3 305 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RIN2Q8WYP3 895 aaPredicted RBP15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CALR3Q96L12 384 aaKnown RBP15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 TUBB2BQ9BVA1 445 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CSNK1G1Q9HCP0 422 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CDY1Q9Y6F8 540 aa15.81■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ARHGEF37A1IGU5 675 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CCDC66A2RUB6 948 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 YJEFN3A6XGL0 299 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 E7ENQ6 273 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 GJB5O95377 273 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 VNN2O95498 520 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 EFEMP2O95967 443 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CPB1P15086 417 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 GPD1P21695 349 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 DNAJB2P25686 324 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 CTNNA2P26232 953 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SLC1A1P43005 524 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PGFP49763 221 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 TAP1Q03518 808 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PIGHQ14442 188 aaPredicted RBP15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ZNF280DQ6N043 979 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ZDHHC14Q8IZN3 488 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 COLGALT1Q8NBJ5 622 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 PBKQ96KB5 322 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RHOXF2BP0C7M4 288 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ZNF143P52747 638 aaPredicted RBP15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 RWDD2BP57060 319 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 MRPS5P82675 430 aaKnown RBP15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 ZFYVE27Q5T4F4 411 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 COL13A1Q5TAT6 717 aaPredicted RBP15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SYPL2Q5VXT5 272 aa15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 FAM43BQ6ZT52 329 aaPredicted RBP15.8■□□□□ 0.12
CSGALNACT1-211ENST00000522854 SLC39A11Q8N1S5 342 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms