RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SPATA31D4Q6ZUB0 917 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 ANKS1BQ7Z6G8 1248 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 D2HGDHQ8N465 521 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZNF808Q8N4W9 903 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 MB21D1Q8N884 522 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 NAXEQ8NCW5 288 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 CCDC150Q8NCX0 1101 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 SUN3Q8TAQ9 357 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 Q8TCH9 128 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 THAP4Q8WY91 577 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 AMBRA1Q9C0C7 1298 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 VPS16Q9H269 839 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 EPC1Q9H2F5 836 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 GBA2Q9HCG7 927 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMEM74BQ9NUR3 256 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 KIF17Q9P2E2 1029 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 IFT80Q9P2H3 777 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 HDAC5Q9UQL6 1122 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 LMTK3Q96Q04 1460 aa4.02□□□□□ -1.77
HMGN1P28-201ENST00000521340 PRAMEF33A0A0G2JMD5 474 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 GXYLT2A0PJZ3 443 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 FAM90A20PA6NIJ5 464 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 H0Y3Z8 333 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 IRAK2O43187 625 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 PRAMEF10O60809 474 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 COQ9O75208 318 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 PIAS2O75928 621 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 PLATP00750 562 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 CFIP05156 583 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 TNFAIP3P21580 790 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 GATA3P23771 443 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 UQCRC1P31930 480 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 PXNP49023 591 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 HNRNPMP52272 730 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 NR1H2P55055 460 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 POLE2P56282 527 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 RNASE9P60153 205 aaKnown RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 AP2B1P63010 937 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 HSD11B2P80365 405 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZNF844Q08AG5 666 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 SCAPQ12770 1279 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 DDX10Q13206 875 aaKnown RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 CYP2A13Q16696 494 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 NBPF8Q3BBV2 869 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 MGAT5BQ3V5L5 792 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 BBS12Q6ZW61 710 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 LIMS2Q7Z4I7 341 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 POLNQ7Z5Q5 900 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 ADGRG5Q8IZF4 528 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 FAM9AQ8IZU1 332 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMEM132CQ8N3T6 1108 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 DNAJB14Q8TBM8 379 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 SKA1Q96BD8 255 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZBTB45Q96K62 511 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 PHACTR3Q96KR7 559 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZSCAN31Q96LW9 406 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 OSBPL9Q96SU4 736 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 RTKNQ9BST9 563 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMPRSS5Q9H3S3 457 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 CD248Q9HCU0 757 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 RIC8AQ9NPQ8 531 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 WASH6PQ9NQA3 447 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 G6PC2Q9NQR9 355 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 HELLSQ9NRZ9 838 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMEM98Q9Y2Y6 226 aa4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 USP15Q9Y4E8 981 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P28-201ENST00000521340 MYADML2A6NDP7 307 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 DIRC3C9JPN6 131 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 K7ESM1 405 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 M0QZQ0 153 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 FCHO1O14526 889 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SOAT2O75908 522 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 USP1O94782 785 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 CD4P01730 458 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 TK1P04183 234 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 HGFP14210 728 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 NR4A1P22736 598 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 CNTFP26441 200 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 NTSR1P30989 418 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 BCAT1P54687 386 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 TLE2Q04725 743 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 FOXD4Q12950 439 aaPredicted RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 G3BP1Q13283 466 aaKnown RBP eCLIP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 HLXQ14774 488 aaPredicted RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 ACOX1Q15067 660 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SMAD1Q15797 465 aaKnown RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SLC4A8Q2Y0W8 1093 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 MSANTD2Q6P1R3 559 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 PIK3AP1Q6ZUJ8 805 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 GATAD2AQ86YP4 633 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 MAPKAPK5Q8IW41 473 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 ABRAQ8N0Z2 381 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 ANKRD35Q8N283 1001 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 METTL25Q8N6Q8 603 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 PPHLN1Q8NEY8 458 aaKnown RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 MBD3L2Q8NHZ7 208 aaPredicted RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 CTHRC1Q96CG8 243 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 MCRS1Q96EZ8 462 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms