RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CYP4F8P98187 520 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 TAF10Q12962 218 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 NCAPHQ15003 741 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 CNGA2Q16280 664 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 MEA1Q16626 185 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 TMEM270Q6UE05 265 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 LCLAT1Q6UWP7 414 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 VITQ6UXI7 678 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
TNPO1-212ENST00000520850 RRAGAQ7L523 313 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 ARHGEF19Q8IW93 802 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 MAB21L3Q8N8X9 362 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 KREMEN1Q96MU8 473 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 KXD1Q9BQD3 176 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 FUCA2Q9BTY2 467 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 UBE2TQ9NPD8 197 aaPredicted RBP17.22■□□□□ 0.35
TNPO1-212ENST00000520850 TDP1Q9NUW8 608 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 FANCLQ9NW38 375 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 SCML2Q9UQR0 700 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 PCDHB4Q9Y5E5 795 aa17.22■□□□□ 0.35
TNPO1-212ENST00000520850 ZNF638Q14966 1978 aaKnown RBP17.22■□□□□ 0.35
TNPO1-212ENST00000520850 OBSL1O75147 1896 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 TRAV19A0A0A6YYK7 116 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 DPYSL4O14531 572 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 CAVIN2O95810 425 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 GLULP15104 373 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 ZNF18P17022 549 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 RFX1P22670 979 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 ADORA2BP29275 332 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 VIPR2P41587 438 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 PSEN1P49768 467 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 KIF11P52732 1056 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 NUBP1P53384 320 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 SLC7A9P82251 487 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 PRKCQQ04759 706 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 PKDCCQ504Y2 493 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 ARHGAP29Q52LW3 1261 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 RAB41Q5JT25 222 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 DPY19L2P1Q6NXN4 242 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 STKLD1Q8NE28 680 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 PBXIP1Q96AQ6 731 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 SHDQ96IW2 340 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 SMOC2Q9H3U7 446 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 LIMA1Q9UHB6 759 aaKnown RBP17.21■□□□□ 0.35
TNPO1-212ENST00000520850 DAAM1Q9Y4D1 1078 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 ANAPC1Q9H1A4 1944 aa17.21■□□□□ 0.35
TNPO1-212ENST00000520850 SMTNL1A8MU46 457 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 RNF225M0QZC1 329 aaPredicted RBP17.2■□□□□ 0.34
TNPO1-212ENST00000520850 O00370 1275 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 OAS1P00973 400 aaKnown RBP17.2■□□□□ 0.34
TNPO1-212ENST00000520850 TPM2P07951 284 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 HDCP19113 662 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 CLCN5P51795 746 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 BCAT1P54687 386 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 STARD6P59095 220 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 KCNMA1Q12791 1236 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 C1orf228Q6PIY5 440 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 SCML4Q8N228 414 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 FBXL6Q8N531 539 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 BPIFB1Q8TDL5 484 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 KCTD13Q8WZ19 329 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 SHC3Q92529 594 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 KAT5Q92993 513 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 USP13Q92995 863 aaPredicted RBP17.2■□□□□ 0.34
TNPO1-212ENST00000520850 FBXO32Q969P5 355 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 CRACR2AQ9BSW2 395 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 DDX23Q9BUQ8 820 aaKnown RBP17.2■□□□□ 0.34
TNPO1-212ENST00000520850 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 THG1LQ9NWX6 298 aaKnown RBP17.2■□□□□ 0.34
TNPO1-212ENST00000520850 HESX1Q9UBX0 185 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 TSPAN16Q9UKR8 245 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 ARHGAP26Q9UNA1 814 aa17.2■□□□□ 0.34
TNPO1-212ENST00000520850 ARNTLO00327 626 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 ZNF263O14978 683 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 XPO1O14980 1071 aaKnown RBP17.19■□□□□ 0.34
TNPO1-212ENST00000520850 SETSIPP0DME0 302 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 BST2Q10589 180 aaKnown RBP17.19■□□□□ 0.34
TNPO1-212ENST00000520850 KRT31Q15323 416 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 SLC44A4Q53GD3 710 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 KLHDC10Q6PID8 442 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 HFE2Q6ZVN8 426 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 CCDC186Q7Z3E2 898 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 TTC30AQ86WT1 665 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 RBBP8NLQ8NC74 664 aaPredicted RBP17.19■□□□□ 0.34
TNPO1-212ENST00000520850 SLC35F5Q8WV83 523 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 RSPRY1Q96DX4 576 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 MSANTD3Q96H12 275 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 LRRC3BQ96PB8 259 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 KCNH6Q9H252 994 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 HSD3B7Q9H2F3 369 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 BRD9Q9H8M2 597 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 SIX2Q9NPC8 291 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 TLR8Q9NR97 1041 aaKnown RBP17.19■□□□□ 0.34
TNPO1-212ENST00000520850 FBXL21Q9UKT6 434 aa17.19■□□□□ 0.34
TNPO1-212ENST00000520850 MYH10P35580 1976 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms