RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 TDP1Q9NUW8 608 aa20.16■□□□□ 0.82
FAM49B-217ENST00000520254 TADA3O75528 432 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 PRAMEF12O95522 483 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 PAEPP09466 180 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 VDRP11473 427 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 PFKLP17858 780 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 GOLGA7BQ2TAP0 167 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 KLHL40Q2TBA0 621 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 ARHGAP29Q52LW3 1261 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 TCP11X2Q5H9J9 407 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 ARHGAP17Q68EM7 881 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 C11orf57Q6ZUT1 292 aaPredicted RBP20.15■□□□□ 0.82
FAM49B-217ENST00000520254 ARHGEF19Q8IW93 802 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 RBBP8NLQ8NC74 664 aaPredicted RBP20.15■□□□□ 0.82
FAM49B-217ENST00000520254 LMO3Q8TAP4 145 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 SMG9Q9H0W8 520 aaKnown RBP20.15■□□□□ 0.82
FAM49B-217ENST00000520254 SAMSN1Q9NSI8 373 aaKnown RBP20.15■□□□□ 0.82
FAM49B-217ENST00000520254 TMEM30AQ9NV96 361 aa20.15■□□□□ 0.82
FAM49B-217ENST00000520254 HDCP19113 662 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 CDK11BP21127 795 aaKnown RBP20.14■□□□□ 0.81
FAM49B-217ENST00000520254 ACO1P21399 889 aaKnown RBP20.14■□□□□ 0.81
FAM49B-217ENST00000520254 BCAT1P54687 386 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 PLCB2Q00722 1185 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 STILQ15468 1287 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 POTEHQ6S545 545 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 SCAMP5Q8TAC9 235 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 TLR8Q9NR97 1041 aaKnown RBP20.14■□□□□ 0.81
FAM49B-217ENST00000520254 APEX2Q9UBZ4 518 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 TSPAN16Q9UKR8 245 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 MYO10Q9HD67 2058 aa20.14■□□□□ 0.81
FAM49B-217ENST00000520254 C2orf78A6NCI8 922 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 ZNF840PA6NDX5 716 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 CHADO15335 359 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 BEST1O76090 585 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 USP8P40818 1118 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 PRKCQQ04759 706 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 ZNF268Q14587 947 aaPredicted RBP20.13■□□□□ 0.81
FAM49B-217ENST00000520254 MLF2Q15773 248 aaPredicted RBP20.13■□□□□ 0.81
FAM49B-217ENST00000520254 FKBP15Q5T1M5 1219 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 ARL14EPQ8N8R7 260 aaPredicted RBP20.13■□□□□ 0.81
FAM49B-217ENST00000520254 ANKRD52Q8NB46 1076 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 ZMIZ2Q8NF64 920 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 KAT5Q92993 513 aa20.13■□□□□ 0.81
FAM49B-217ENST00000520254 NUP210Q8TEM1 1887 aaPredicted RBP20.13■□□□□ 0.81
FAM49B-217ENST00000520254 NCANO14594 1321 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 TNFRSF10BO14763 440 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 PDGFBP01127 241 aaPredicted RBP20.12■□□□□ 0.81
FAM49B-217ENST00000520254 SLC9A1P19634 815 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 FCHO2Q0JRZ9 810 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 BST2Q10589 180 aaKnown RBP20.12■□□□□ 0.81
FAM49B-217ENST00000520254 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
FAM49B-217ENST00000520254 ANO6Q4KMQ2 910 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 SLC44A4Q53GD3 710 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 HECTD3Q5T447 861 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 PHLDB3Q6NSJ2 640 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 UBR7Q8N806 425 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 USP13Q92995 863 aaPredicted RBP20.12■□□□□ 0.81
FAM49B-217ENST00000520254 TBC1D17Q9HA65 648 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 TAB2Q9NYJ8 693 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 GMIPQ9P107 970 aa20.12■□□□□ 0.81
FAM49B-217ENST00000520254 M0QYV0 167 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 MED7O43513 233 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 SETSIPP0DME0 302 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 MBL2P11226 248 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-217ENST00000520254 KPNA1P52294 538 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-217ENST00000520254 ARHGAP44Q17R89 818 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 ASTLQ6HA08 431 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-217ENST00000520254 TPRG1Q6ZUI0 275 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 TADA2BQ86TJ2 420 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 DDX42Q86XP3 938 aaKnown RBP eCLIP20.11■□□□□ 0.81
FAM49B-217ENST00000520254 RSPRY1Q96DX4 576 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 CYP2S1Q96SQ9 504 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 LRRC4Q9HBW1 653 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 HEBP1Q9NRV9 189 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 FANCLQ9NW38 375 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 CHORDC1Q9UHD1 332 aaPredicted RBP20.11■□□□□ 0.81
FAM49B-217ENST00000520254 CCL26Q9Y258 94 aa20.11■□□□□ 0.81
FAM49B-217ENST00000520254 MRPS17Q9Y2R5 130 aaKnown RBP20.11■□□□□ 0.81
FAM49B-217ENST00000520254 TECTAO75443 2155 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 KRBA1A5PL33 1030 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 SMTNL1A8MU46 457 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 PON1P27169 355 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 IFNAR2P48551 515 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 TUBP50607 506 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 MTF1Q14872 753 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 CDKAL1Q5VV42 579 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 SIX6OS1Q8N1H7 587 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 AOPEPQ8N6M6 819 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 KREMEN1Q96MU8 473 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 VPS16Q9H269 839 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 TRPV5Q9NQA5 729 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 ARHGAP26Q9UNA1 814 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 SCML2Q9UQR0 700 aa20.1■□□□□ 0.81
FAM49B-217ENST00000520254 MYH10P35580 1976 aa20.09■□□□□ 0.81
FAM49B-217ENST00000520254 BECN2A8MW95 431 aa20.09■□□□□ 0.81
FAM49B-217ENST00000520254 O00370 1275 aa20.09■□□□□ 0.81
FAM49B-217ENST00000520254 MAN2B1O00754 1011 aa20.09■□□□□ 0.81
FAM49B-217ENST00000520254 XPO1O14980 1071 aaKnown RBP20.09■□□□□ 0.81
FAM49B-217ENST00000520254 CYP26A1O43174 497 aa20.09■□□□□ 0.81
FAM49B-217ENST00000520254 BRD2P25440 801 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms