RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 FANCLQ9NW38 375 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 ARHGAP26Q9UNA1 814 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 OBSL1O75147 1896 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 NUP210Q8TEM1 1887 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 COL4A2P08572 1712 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF318Q5VUA4 2279 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 MYO10Q9HD67 2058 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 BECN2A8MW95 431 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 CHADO15335 359 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 PRAMEF12O95522 483 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 GLULP15104 373 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SLC9A1P19634 815 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 YWHAQP27348 245 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 PSEN1P49768 467 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 NUBP1P53384 320 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 BCAT1P54687 386 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 MFAP3P55082 362 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 PFKPQ01813 784 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 USP4Q13107 963 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 IQCB1Q15051 598 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 STXBP5Q5T5C0 1151 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 GPR158Q5T848 1215 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SDHAF4Q5VUM1 108 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 PM20D1Q6GTS8 502 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 VITQ6UXI7 678 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 TTC30AQ86WT1 665 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 CELF5Q8N6W0 485 aaKnown RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SLC35F5Q8WV83 523 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 LRRC3BQ96PB8 259 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SLITRK1Q96PX8 696 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 ERGIC2Q96RQ1 377 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 FAM49BQ9NUQ9 324 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 CLIC5Q9NZA1 410 aa12.19□□□□□ -0.46
SPIDR-212ENST00000519661 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.19□□□□□ -0.467e-6■■■■■ 27.7
SPIDR-212ENST00000519661 ARIH1Q9Y4X5 557 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-212ENST00000519661 SHISA7A6NL88 538 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 LGALS16A8MUM7 142 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 GJA1P17302 382 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 STARD6P59095 220 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TAF10Q12962 218 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 ORC1Q13415 861 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TAF12Q16514 161 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TMEM31Q5JXX7 168 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 FAM71AQ8IYT1 594 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 RBBP8NLQ8NC74 664 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TFAP2BQ92481 460 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 USP13Q92995 863 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-212ENST00000519661 MSANTD3Q96H12 275 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
SPIDR-212ENST00000519661 FAM83CQ9BQN1 747 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 OSBPL6Q9BZF3 934 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 PLA2G2FQ9BZM2 168 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TDP1Q9NUW8 608 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TRPM5Q9NZQ8 1165 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 TSPAN16Q9UKR8 245 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 SIK3Q9Y2K2 1263 aa12.18□□□□□ -0.46
SPIDR-212ENST00000519661 F5P12259 2224 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 TMEM221A6NGB7 291 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 HEPACAM2A8MVW5 462 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 M0R296 226 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 NARSO43776 548 aaKnown RBP12.17□□□□□ -0.46
SPIDR-212ENST00000519661 USP17L7P0C7H9 530 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 UCHL3P15374 230 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF165P49910 485 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 MAP3K7CLP57077 242 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 CYP4F8P98187 520 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 PRKCQQ04759 706 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 BST2Q10589 180 aaKnown RBP12.17□□□□□ -0.46
SPIDR-212ENST00000519661 LRMPQ12912 555 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 ZNF77Q15935 545 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 ARHGAP29Q52LW3 1261 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 TXNDC8Q6A555 127 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 BEND5Q7L4P6 421 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 RRAGAQ7L523 313 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 BHLHA9Q7RTU4 235 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 GPRIN1Q7Z2K8 1008 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 SCAMP5Q8TAC9 235 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 IRF7Q92985 503 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
SPIDR-212ENST00000519661 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 SLC22A12Q96S37 553 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 KXD1Q9BQD3 176 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 CRACR2AQ9BSW2 395 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 LRFN3Q9BTN0 628 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
SPIDR-212ENST00000519661 TRMT61BQ9BVS5 477 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms