RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SERPINB4P48594 390 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 SH3BGRP55822 239 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZNF235Q14590 738 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 RGS9BPQ6ZS82 235 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 ECHDC2Q86YB7 292 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 SLC7A14Q8TBB6 771 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 PARK7Q99497 189 aaKnown RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 TBC1D10AQ9BXI6 508 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 OLA1Q9NTK5 396 aaKnown RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.27□□□□□ -0.61
PCDHGA1-202ENST00000517417 E5RI56 91 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 WNT10BO00744 389 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 TADA2AO75478 443 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 RPA3P35244 121 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 GNL1P36915 607 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 NUMBP49757 651 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ALDH18A1P54886 795 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 SNRPFP62306 86 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PTK7Q13308 1070 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 LAMC2Q13753 1193 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 STILQ15468 1287 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 FSCBQ5H9T9 825 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZNF677Q86XU0 584 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 RDM1Q8NG50 284 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 INPP5DQ92835 1189 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ASIC4Q96FT7 647 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 MOSPD1Q9UJG1 213 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 C3orf70A6NLC5 250 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 FSCN2O14926 492 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 VTNP04004 478 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PECAM1P16284 738 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ATP4AP20648 1035 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 DGKDQ16760 1214 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ANKRD20A4Q4UJ75 823 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 DAB2IPQ5VWQ8 1189 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 SLC51AQ86UW1 340 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM71AQ8IYT1 594 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 HSD17B14Q9BPX1 270 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 WDR18Q9BV38 432 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PAPOLBQ9NRJ5 636 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ADA2Q9NZK5 511 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PRG3Q9Y2Y8 225 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ENTPD5O75356 428 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 IL18RAPO95256 599 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 RARRES1P49788 294 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 CCNHP51946 323 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 TAS2R42Q7RTR8 314 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 CPNE8Q86YQ8 564 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM111AQ96PZ2 611 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 MRPL46Q9H2W6 279 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PRDM5Q9NQX1 630 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 CORO1CQ9ULV4 474 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 PCDHAC2Q9Y5I4 1007 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 E7ENQ6 273 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 DNALI1O14645 258 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 DYNC1I2Q13409 638 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 GOLGA7BQ2TAP0 167 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ACOT1Q86TX2 421 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 EXD1Q8NHP7 514 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 CCDC138Q96M89 665 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 TMEM121Q9BTD3 319 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 THTPAQ9BU02 230 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 LRRC4CQ9HCJ2 640 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ANLNQ9NQW6 1124 aa11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 AFF4Q9UHB7 1163 aaKnown RBP11.26□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZSCAN5DPP0CG00 497 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 ACADSP16219 412 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 HOXD10P28358 340 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 HOXD13P35453 343 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 SKIV2L2P42285 1042 aaKnown RBP11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 PCSK7Q16549 785 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 DACT2Q5SW24 774 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 SNX30Q5VWJ9 437 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZNF75CPQ92670 426 aaPredicted RBP11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 PAFAH2Q99487 392 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 WWP1Q9H0M0 922 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 RSAD1Q9HA92 442 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 KRT82Q9NSB4 513 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 MYH3P11055 1940 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 ATP9AO75110 1047 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 PSMD10O75832 226 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 CD4P01730 458 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 CYP3A4P08684 503 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 NCAM1P13591 858 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 GPD1P21695 349 aa11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 PTDSS1P48651 473 aaKnown RBP11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
PCDHGA1-202ENST00000517417 CDC42EP1Q00587 391 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms