RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 TMEM86AQ8N2M4 240 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 ATRIPQ8WXE1 791 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 PAGE5Q96GU1 130 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 ANKRD36BP1Q96IX9 119 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 SMOQ99835 787 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 RCOR1Q9UKL0 485 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 CDH9Q9ULB4 789 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 INVSQ9Y283 1065 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
PABPC1-202ENST00000517403 PLXND1Q9Y4D7 1925 aa9.22□□□□□ -0.93
PABPC1-202ENST00000517403 NUP205Q92621 2012 aa9.21□□□□□ -0.93
PABPC1-202ENST00000517403 HHLA1C9JL84 531 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 LEFTY2O00292 366 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 COCHO43405 550 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 FGF19O95750 216 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 TNNC2P02585 160 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 CKMP06732 381 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 TRIM49P0CI25 452 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 TRIM49CP0CI26 452 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 PTPN1P18031 435 aaKnown RBP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 PAX3P23760 479 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 ABCD1P33897 745 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 AVPR1AP37288 418 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 ASPAP45381 313 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 ME1P48163 572 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 NDUFA8P51970 172 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 MYL7Q01449 175 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 PPP3CAQ08209 521 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 SMARCB1Q12824 385 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 TAF10Q12962 218 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 KNOP1Q1ED39 458 aaKnown RBP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 DUOXA2Q1HG44 320 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 WDR72Q3MJ13 1102 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 ZCWPW2Q504Y3 356 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 EMC10Q5UCC4 262 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 ERMP1Q7Z2K6 904 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 DGLUCYQ7Z3D6 616 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 WDR5BQ86VZ2 330 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 XXYLT1Q8NBI6 393 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 RPLP0P6Q8NHW5 317 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 MYCBPAPQ8TBZ2 947 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 PARD3BQ8TEW8 1205 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 WHAMMQ8TF30 809 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 OSCP1Q8WVF1 389 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 MRPS31Q92665 395 aaKnown RBP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 E2F7Q96AV8 911 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 EEF2KMTQ96G04 330 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 FUBP3Q96I24 572 aaKnown RBP eCLIP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 SPATA17Q96L03 361 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 MMS19Q96T76 1030 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 CUEDC2Q9H467 287 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 CD93Q9NPY3 652 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 SEMA4GQ9NTN9 838 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
PABPC1-202ENST00000517403 ARHGAP26Q9UNA1 814 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 CPQQ9Y646 472 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 UBE4BO95155 1302 aa9.21□□□□□ -0.94
PABPC1-202ENST00000517403 SDK1Q7Z5N4 2213 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 NCAM2O15394 837 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 TACC1O75410 805 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 STAU1O95793 577 aaKnown RBP9.2□□□□□ -0.94
PABPC1-202ENST00000517403 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 TCF3P15923 654 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 PCSK1P29120 753 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 HOXA6P31267 233 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 LHX1P48742 406 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 SEC13P55735 322 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 RPL10AP62906 217 aaKnown RBP9.2□□□□□ -0.94
PABPC1-202ENST00000517403 SIM2Q14190 667 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-202ENST00000517403 LRRC32Q14392 662 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 ZACNQ401N2 412 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 DGKKQ5KSL6 1271 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 LAIR1Q6GTX8 287 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 PRR23CQ6ZRP0 262 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 FILIP1Q7Z7B0 1213 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 ACOT1Q86TX2 421 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 LONP2Q86WA8 852 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 MIB1Q86YT6 1006 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 C12orf29Q8N999 325 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 B3GALNT2Q8NCR0 500 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 OR6B3Q8NGW1 331 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 SPATA18Q8TC71 538 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 CACTINQ8WUQ7 758 aaKnown RBP9.2□□□□□ -0.94
PABPC1-202ENST00000517403 TSC1Q92574 1164 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 SEMA4DQ92854 862 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 ERCC4Q92889 916 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-202ENST00000517403 ERLEC1Q96DZ1 483 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 MSANTD3Q96H12 275 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 ZNF396Q96N95 335 aaPredicted RBP9.2□□□□□ -0.94
PABPC1-202ENST00000517403 GCNAQ96QF7 691 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 P2RY13Q9BPV8 354 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 IER2Q9BTL4 223 aa9.2□□□□□ -0.94
PABPC1-202ENST00000517403 TPSD1Q9BZJ3 242 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms