RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 RGS7P49802 495 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 SLC7A5Q01650 507 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 GUCY2DQ02846 1103 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 SLC25A11Q02978 314 aaKnown RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 TIGD5Q53EQ6 642 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 MDH1BQ5I0G3 518 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 EFHC1Q5JVL4 640 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 SYDE1Q6ZW31 735 aaPredicted RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 THEM5Q8N1Q8 247 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 PRELID2Q8N945 189 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 MYCBPAPQ8TBZ2 947 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 MAGOHBQ96A72 148 aaKnown RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 SMARCD1Q96GM5 515 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 SLITRK1Q96PX8 696 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 MRPL9Q9BYD2 267 aaKnown RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 FAM129AQ9BZQ8 928 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 HIPK3Q9H422 1215 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 LRRC19Q9H756 370 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 EPB41L5Q9HCM4 733 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 FAM114A2Q9NRY5 505 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
LMNA-224ENST00000515711 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
LMNA-224ENST00000515711 CDH23Q9H251 3354 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 MYO16Q9Y6X6 1858 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 PAPSS1O43252 624 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 HSF2BPO75031 334 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 CXCL10P02778 98 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 GLI1P08151 1106 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 IBSPP21815 317 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 TKTP29401 623 aaKnown RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 SDC4P31431 198 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 RFC2P35250 354 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 PTPN9P43378 593 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 TSPY1Q01534 308 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 RNASELQ05823 741 aaKnown RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 GPS2Q13227 327 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 KLF1Q13351 362 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 SIX1Q15475 284 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 INTS6LQ5JSJ4 861 aaKnown RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 AADACL2Q6P093 401 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 RTN4RL1Q86UN2 441 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 VSIG1Q86XK7 387 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 AENQ8WTP8 325 aaKnown RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 HDAC7Q8WUI4 952 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 SEC14L1Q92503 715 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 TBCBQ99426 244 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 FRMD8P1Q9BZ68 369 aaPredicted RBP12.53□□□□□ -0.4
LMNA-224ENST00000515711 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
LMNA-224ENST00000515711 COL4A4P53420 1690 aaPredicted RBP12.52□□□□□ -0.4
LMNA-224ENST00000515711 HCRTO43612 131 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 DAB1O75553 588 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 SEC31AO94979 1220 aaKnown RBP12.52□□□□□ -0.41
LMNA-224ENST00000515711 GAS8O95995 478 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 RARAP10276 462 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 RALAP11233 206 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 ACAT1P24752 427 aaKnown RBP12.52□□□□□ -0.41
LMNA-224ENST00000515711 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.41
LMNA-224ENST00000515711 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
LMNA-224ENST00000515711 LMNB2Q03252 620 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 OVOS1Q6IE37 1185 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 CCDC137Q6PK04 289 aaKnown RBP12.52□□□□□ -0.41
LMNA-224ENST00000515711 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
LMNA-224ENST00000515711 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 SIX6OS1Q8N1H7 587 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 EMC1Q8N766 993 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 TTC13Q8NBP0 860 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 DBF4BQ8NFT6 615 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 TEKT4Q8WW24 435 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 RXFP2Q8WXD0 754 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 B3GNT5Q9BYG0 378 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 C11orf49Q9H6J7 331 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 PNPLA8Q9NP80 782 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 CRTAC1Q9NQ79 661 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 CACNG4Q9UBN1 327 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 USP18Q9UMW8 372 aa12.52□□□□□ -0.41
LMNA-224ENST00000515711 VWA8A3KMH1 1905 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms