RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 THG1LQ9NWX6 298 aaKnown RBP12.19□□□□□ -0.46
VCAN-212ENST00000515397 WNT6Q9Y6F9 365 aa12.19□□□□□ -0.46
VCAN-212ENST00000515397 R4GN57 208 aa12.19□□□□□ -0.46
VCAN-212ENST00000515397 MYO15AQ9UKN7 3530 aa12.19□□□□□ -0.46
VCAN-212ENST00000515397 ATP8B3O60423 1300 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 SPECC1L-ADORA2AF8WAN1 911 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 MAN2B1O00754 1011 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 TNFRSF10BO14763 440 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 STX10O60499 249 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 DDX6P26196 483 aaKnown RBP eCLIP12.18□□□□□ -0.46
VCAN-212ENST00000515397 WEE1P30291 646 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 FMO5P49326 533 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 ENPEPQ07075 957 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 PAK1Q13153 545 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
VCAN-212ENST00000515397 MAML2Q8IZL2 1156 aaPredicted RBP12.18□□□□□ -0.46
VCAN-212ENST00000515397 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 KAT5Q92993 513 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 CEP63Q96MT8 703 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 FAM83CQ9BQN1 747 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 FBRSL1Q9HCM7 1045 aaKnown RBP12.18□□□□□ -0.46
VCAN-212ENST00000515397 OBP2AQ9NY56 170 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 GMIPQ9P107 970 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 CPQQ9Y646 472 aa12.18□□□□□ -0.46
VCAN-212ENST00000515397 WDR87Q6ZQQ6 2873 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 LEFTY2O00292 366 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 TBX18O95935 607 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 FAM200BP0CF97 657 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 CTHP32929 405 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 RAD23BP54727 409 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 MTAPQ13126 283 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 RUNX3Q13761 415 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 GAS6Q14393 721 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 MTF1Q14872 753 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 ZNF77Q15935 545 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 CC2D1AQ6P1N0 951 aaPredicted RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 CLEC20AQ6ZU45 233 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 SLC4A11Q8NBS3 891 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 WBP2Q969T9 261 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 CHFRQ96EP1 664 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 HNRNPABQ99729 332 aaKnown RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 CCSER2Q9H7U1 834 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 TRPV5Q9NQA5 729 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 POLR3BQ9NW08 1133 aaPredicted RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 DUS2Q9NX74 493 aaKnown RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 MRPS17Q9Y2R5 130 aaKnown RBP12.17□□□□□ -0.46
VCAN-212ENST00000515397 TICRRQ7Z2Z1 1910 aa12.17□□□□□ -0.46
VCAN-212ENST00000515397 EP300Q09472 2414 aaPredicted RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 BICDL2A1A5D9 508 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 RTN3O95197 1032 aaPredicted RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 SP9P0CG40 484 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 CHRNB1P11230 501 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 NUBP1P53384 320 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 CUL2Q13617 745 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 ITPRIPL2Q3MIP1 535 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 Q6ZS52 159 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 ARHGEF19Q8IW93 802 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 NDRG1Q92597 394 aaKnown RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 SLITRK1Q96PX8 696 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 NELL2Q99435 816 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 OSBPL6Q9BZF3 934 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 CLSTN2Q9H4D0 955 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 C8orf33Q9H7E9 229 aaPredicted RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 METTL14Q9HCE5 456 aaKnown RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 C2orf42Q9NWW7 574 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 OSER1Q9NX31 292 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 IL37Q9NZH6 218 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 CFAP97Q9P2B7 532 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 COQ4Q9Y3A0 265 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 GPR179Q6PRD1 2367 aa12.16□□□□□ -0.46
VCAN-212ENST00000515397 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
VCAN-212ENST00000515397 PTPRDP23468 1912 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 ANTXRLA6NF34 631 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
VCAN-212ENST00000515397 TULP2O00295 520 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 MDM4O15151 490 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 NCAM2O15394 837 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 CYP26A1O43174 497 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 COCHO43405 550 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 LAMTOR5O43504 91 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 OAS1P00973 400 aaKnown RBP12.15□□□□□ -0.46
VCAN-212ENST00000515397 IRF1P10914 325 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 IFNAR2P48551 515 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 GALK1P51570 392 aa12.15□□□□□ -0.46
VCAN-212ENST00000515397 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms