RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 EHD2Q9NZN4 543 aa22.13■■□□□ 1.13
LSM6-207ENST00000515311 NENFQ9UMX5 172 aa22.13■■□□□ 1.13
LSM6-207ENST00000515311 REV3LO60673 3130 aa22.13■■□□□ 1.13
LSM6-207ENST00000515311 RTN3O95197 1032 aaPredicted RBP22.12■■□□□ 1.13
LSM6-207ENST00000515311 CSH1P0DML2 217 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 CSH2P0DML3 217 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 MMP8P22894 467 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 NSFP46459 744 aaKnown RBP22.12■■□□□ 1.13
LSM6-207ENST00000515311 SLC5A3P53794 718 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 SDHAF4Q5VUM1 108 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 ACAD10Q6JQN1 1059 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 DENND5BQ6ZUT9 1274 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 GPRIN1Q7Z2K8 1008 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 TMEM110Q86TL2 294 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 PHF13Q86YI8 300 aaPredicted RBP22.12■■□□□ 1.13
LSM6-207ENST00000515311 ELMOD1Q8N336 334 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 CPA5Q8WXQ8 436 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 PSMG2Q969U7 264 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 PPP1R13BQ96KQ4 1090 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 CPXM1Q96SM3 734 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 LRRC4Q9HBW1 653 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 IL37Q9NZH6 218 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 NAGPAQ9UK23 515 aa22.12■■□□□ 1.13
LSM6-207ENST00000515311 MYO16Q9Y6X6 1858 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 SLC38A8A6NNN8 435 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 LINC01565O15544 149 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 NRDCO43847 1150 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 RTN2O75298 545 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 RFPL2O75678 378 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 FOSL2P15408 326 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 HOXB8P17481 243 aaPredicted RBP22.11■■□□□ 1.13
LSM6-207ENST00000515311 CYLC1P35663 651 aaPredicted RBP22.11■■□□□ 1.13
LSM6-207ENST00000515311 RGS7P49802 495 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 PTPN20Q4JDL3 420 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 ERICH1Q86X53 443 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 GPR152Q8TDT2 470 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 IPO4Q8TEX9 1081 aaKnown RBP22.11■■□□□ 1.13
LSM6-207ENST00000515311 GIPC2Q8TF65 315 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 PABPC5Q96DU9 382 aaKnown RBP22.11■■□□□ 1.13
LSM6-207ENST00000515311 TRMT2BQ96GJ1 504 aaKnown RBP22.11■■□□□ 1.13
LSM6-207ENST00000515311 MYRFLQ96LU7 910 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 TTLL2Q9BWV7 592 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 PRKD2Q9BZL6 878 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 MIS12Q9H081 205 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 FBXO44Q9H4M3 255 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 ST7Q9NRC1 585 aa22.11■■□□□ 1.13
LSM6-207ENST00000515311 SOWAHDA6NJG2 315 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 SPDYE4A6NLX3 237 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 XYLBO75191 536 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 GABBR2O75899 941 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 LCA5LO95447 670 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 GABRB2P47870 512 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 TKTL1P51854 596 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 GFPT1Q06210 699 aaPredicted RBP22.1■■□□□ 1.13
LSM6-207ENST00000515311 C1QBPQ07021 282 aaKnown RBP22.1■■□□□ 1.13
LSM6-207ENST00000515311 ANKRD54Q6NXT1 300 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 ALKBH5Q6P6C2 394 aaKnown RBP22.1■■□□□ 1.13
LSM6-207ENST00000515311 SIX6OS1Q8N1H7 587 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 SCML4Q8N228 414 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 MICALL1Q8N3F8 863 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 VCPIP1Q96JH7 1222 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 ISCUQ9H1K1 167 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 SYNCQ9H7C4 482 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 TAS2R14Q9NYV8 317 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 USP3Q9Y6I4 520 aa22.1■■□□□ 1.13
LSM6-207ENST00000515311 CCDC195A0A1B0GUA6 201 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 FAM92AA1XBS5 289 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 E5RJQ4 531 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 CCL16O15467 120 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 FBXO21O94952 628 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 HMGA1P17096 107 aaKnown RBP22.09■■□□□ 1.13
LSM6-207ENST00000515311 ADIGQ0VDE8 80 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 MON1BQ7L1V2 547 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 DNAJB7Q7Z6W7 309 aaPredicted RBP22.09■■□□□ 1.13
LSM6-207ENST00000515311 SCAMP5Q8TAC9 235 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 ZNF707Q96C28 371 aaPredicted RBP22.09■■□□□ 1.13
LSM6-207ENST00000515311 C18orf8Q96DM3 657 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 ZNF512Q96ME7 567 aaPredicted RBP22.09■■□□□ 1.13
LSM6-207ENST00000515311 CNGB3Q9NQW8 809 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 SPTLC3Q9NUV7 552 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 STRIP2Q9ULQ0 834 aa22.09■■□□□ 1.13
LSM6-207ENST00000515311 EPN1Q9Y6I3 576 aaPredicted RBP22.09■■□□□ 1.13
LSM6-207ENST00000515311 NCANO14594 1321 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 EIF3CLB5ME19 914 aaKnown RBP22.08■■□□□ 1.13
LSM6-207ENST00000515311 ARHGAP6O43182 974 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 NDUFA10O95299 355 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 FTLP02792 175 aaPredicted RBP22.08■■□□□ 1.13
LSM6-207ENST00000515311 ERBB2P04626 1255 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 CALB1P05937 261 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 YWHAQP27348 245 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 USP46P62068 366 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 CCZ1BP86790 482 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 CCZ1P86791 482 aaPredicted RBP22.08■■□□□ 1.13
LSM6-207ENST00000515311 PTP4A2Q12974 167 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 MTMR3Q13615 1198 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 TAF12Q16514 161 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 CCDC122Q5T0U0 273 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 C10orf76Q5T2E6 689 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 PM20D1Q6GTS8 502 aa22.08■■□□□ 1.13
LSM6-207ENST00000515311 RAD9BQ6WBX8 426 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms