RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MTHFD1LQ6UB35 978 aa13.65□□□□□ -0.22
TCOF1-213ENST00000514442 GANCQ8TET4 914 aa13.65□□□□□ -0.22
TCOF1-213ENST00000514442 SLC20A1Q8WUM9 679 aa13.65□□□□□ -0.22
TCOF1-213ENST00000514442 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-213ENST00000514442 AUHQ13825 339 aaKnown RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 SV2CQ496J9 727 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 DCAF6Q58WW2 860 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 ITPRIPL1Q6GPH6 555 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 SLC13A5Q86YT5 568 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 DNAAF2Q9NVR5 837 aaKnown RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 E2F6O75461 281 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 MUTP22033 750 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 RARRES1P49788 294 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 TMEM119Q4V9L6 283 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 C15orf52Q6ZUT6 534 aaKnown RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 PIGWQ7Z7B1 504 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 OR6P1Q8NGX9 317 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 FEZF2Q8TBJ5 459 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 ZSWIM1Q9BR11 485 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 RAB6BQ9NRW1 208 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 NAALADL1Q9UQQ1 740 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 SH3GLB1Q9Y371 365 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 A0A087WZ62 844 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 PDHXO00330 501 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 KLHL2O95198 593 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 RALAP11233 206 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 ETS2P15036 469 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 SLC7A14Q8TBB6 771 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 TRPC7Q9HCX4 862 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 KRT36O76013 467 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 RPL21P46778 160 aaKnown RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 ACAD10Q6JQN1 1059 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 MPZL3Q6UWV2 235 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 ASCC2Q9H1I8 757 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 MRPL40Q9NQ50 206 aaKnown RBP13.64□□□□□ -0.23
TCOF1-213ENST00000514442 MID2Q9UJV3 735 aa13.64□□□□□ -0.23
TCOF1-213ENST00000514442 CST8O60676 142 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 RECQLP46063 649 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF571Q7Z3V5 609 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 RNF135Q8IUD6 432 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 CCNYL1Q8N7R7 359 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 FAM13CQ8NE31 585 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 TMEM120AQ9BXJ8 343 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 CYP24A1Q07973 514 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SREBF2Q12772 1141 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GALNT4Q8N4A0 578 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 MED15Q96RN5 788 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 TJP2Q9UDY2 1190 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 CYP11B1P15538 503 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GPD1P21695 349 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 MAP4P27816 1152 aaKnown RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 FKBP1AP62942 108 aaKnown RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 TBL3Q12788 808 aaKnown RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GLB1LQ6UWU2 654 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SLC47A2Q86VL8 602 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 TMPRSS6Q8IU80 811 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GPC2Q8N158 579 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GLIS3Q8NEA6 775 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SDCCAG3Q96C92 435 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SEPT3Q9UH03 358 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 TAGLN3Q9UI15 199 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SIK3Q9Y2K2 1263 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 STAG3L1P0CL83 205 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SCNN1BP51168 640 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 HSD17B4P51659 736 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 FCGRTP55899 365 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 NUP107P57740 925 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SLC45A4Q5BKX6 768 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 ACOT1Q86TX2 421 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
TCOF1-213ENST00000514442 ARHGEF3Q9NR81 526 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 SLC38A7Q9NVC3 462 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 GTSE1Q9NYZ3 720 aa13.63□□□□□ -0.23
TCOF1-213ENST00000514442 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
TCOF1-213ENST00000514442 TAF6P49848 677 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 LAMTOR4Q0VGL1 99 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF235Q14590 738 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 VEPH1Q14D04 833 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 INAQ16352 499 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 TRIM16LQ309B1 348 aa13.62□□□□□ -0.23
TCOF1-213ENST00000514442 PAN2Q504Q3 1202 aaKnown RBP13.62□□□□□ -0.23
TCOF1-213ENST00000514442 ZNF677Q86XU0 584 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms