RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 PDE6CP51160 858 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 TP53BP2Q13625 1128 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 PRKG1Q13976 671 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 TIGD6Q17RP2 521 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 LY6KQ17RY6 165 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 NRN1LQ496H8 165 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 CERCAMQ5T4B2 595 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 LIN54Q6MZP7 749 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 MRNIPQ6NTE8 343 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 JMJD6Q6NYC1 403 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-207ENST00000513819 KRT73Q86Y46 540 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 SLC25A43Q8WUT9 341 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-207ENST00000513819 TRAPPC12Q8WVT3 735 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 ATG4AQ8WYN0 398 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 TRIM63Q969Q1 353 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 FAM227BQ96M60 508 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 PAGR1Q9BTK6 254 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 ISCA1Q9BUE6 129 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 TMEM120AQ9BXJ8 343 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 TRIM5Q9C035 493 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 DKK2Q9UBU2 259 aa5.1□□□□□ -1.59
NIPBL-207ENST00000513819 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.1□□□□□ -1.59
NIPBL-207ENST00000513819 FER1L4A9Z1Z3 1794 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 ADM5C9JUS6 153 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 VNN1O95497 513 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 PTMAP06454 111 aaKnown RBP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 ITGA5P08648 1049 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 C1SP09871 688 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 SRGAP2BP0DMP2 458 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 GYS1P13807 737 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 NPPBP16860 134 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 PTMSP20962 102 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 UQCRC1P31930 480 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 BMPR1AP36894 532 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 PGDP52209 483 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 CTSWP56202 376 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 NSUN2Q08J23 767 aaKnown RBP eCLIP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 GPS1Q13098 491 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 EIF2B5Q13144 721 aaKnown RBP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 CCNIQ14094 377 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 CDSNQ15517 529 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 TAF5Q15542 800 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 SULT6B1Q6IMI4 303 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 MZT2AQ6P582 158 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 SUGP1Q8IWZ8 645 aaKnown RBP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 ABRAQ8N0Z2 381 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 B3GALNT2Q8NCR0 500 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 OR1N1Q8NGS0 311 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 SSH3Q8TE77 659 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 OSCP1Q8WVF1 389 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 ATRIPQ8WXE1 791 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 LPIN2Q92539 896 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 DVL3Q92997 716 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 C17orf80Q9BSJ5 609 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 EPS8L2Q9H6S3 715 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 ZNF703Q9H7S9 590 aaPredicted RBP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 TMEM8AQ9HCN3 771 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 ITM2CQ9NQX7 267 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 DNAJB11Q9UBS4 358 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 CNOT11Q9UKZ1 510 aaKnown RBP5.09□□□□□ -1.59
NIPBL-207ENST00000513819 TESMINQ9Y4I5 508 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 DTNAQ9Y4J8 743 aa5.09□□□□□ -1.59
NIPBL-207ENST00000513819 TMEM200CA6NKL6 621 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 IPO5O00410 1097 aaKnown RBP5.08□□□□□ -1.6
NIPBL-207ENST00000513819 FCHO1O14526 889 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 PCDH17O14917 1159 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 CCNT2O60583 730 aaKnown RBP5.08□□□□□ -1.6
NIPBL-207ENST00000513819 DHRS4L1P0CG22 281 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 ZNF20P17024 532 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 PRKAR1BP31321 381 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 BCAT1P54687 386 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 DGCR2P98153 550 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 FOXO1Q12778 655 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 FSTL1Q12841 308 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 SF3B3Q15393 1217 aaKnown RBP5.08□□□□□ -1.6
NIPBL-207ENST00000513819 TIGD2Q4W5G0 525 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 SLC9A4Q6AI14 798 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 ABLIM2Q6H8Q1 611 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 ARMC6Q6NXE6 501 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 GPR149Q86SP6 731 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 GATAD2AQ86YP4 633 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 STT3BQ8TCJ2 826 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 GRAMD1AQ96CP6 724 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 PTCD3Q96EY7 689 aaKnown RBP5.08□□□□□ -1.6
NIPBL-207ENST00000513819 MYEOVQ96EZ4 313 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 PLEKHG4BQ96PX9 1271 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 HIST1H2AAQ96QV6 131 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 CDK5RAP1Q96SZ6 601 aaKnown RBP5.08□□□□□ -1.6
NIPBL-207ENST00000513819 KATNAL1Q9BW62 490 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 MLXIPQ9HAP2 919 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 SAGE1Q9NXZ1 904 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 TMOD4Q9NZQ9 345 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 ANKFY1Q9P2R3 1169 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 VPS51Q9UID3 782 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 HS3ST4Q9Y661 456 aa5.08□□□□□ -1.6
NIPBL-207ENST00000513819 CENPVL1A0A0U1RR11 272 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 M0R3H8 397 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 DNPH1O43598 174 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms