RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PCDHGB2Q9Y5G2 931 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 UBR1Q8IWV7 1749 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 SLIT1O75093 1534 aa4.97□□□□□ -1.61
HTT-210ENST00000512909 VWDEQ8N2E2 1590 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 NEURL4Q96JN8 1562 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 IQSEC2Q5JU85 1478 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 A0A1W2PS29 197 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 UNC119BA6NIH7 251 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 AHRRA9YTQ3 701 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 HNRNPDLO14979 420 aaKnown RBP4.96□□□□□ -1.62
HTT-210ENST00000512909 CCP110O43303 1012 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 NCK2O43639 380 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 SNX2O60749 519 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ZNF20P17024 532 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 FGFR2P21802 821 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 CPT1AP50416 773 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ADAM17P78536 824 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ICA1Q05084 483 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 PMS2P11Q13670 270 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 TOB2Q14106 344 aaPredicted RBP4.96□□□□□ -1.62
HTT-210ENST00000512909 GRAMD1BQ3KR37 738 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 DGKKQ5KSL6 1271 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 RBM20Q5T481 1227 aaKnown RBP4.96□□□□□ -1.62
HTT-210ENST00000512909 TEDDM1Q5T9Z0 273 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ANO1Q5XXA6 986 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ICE2Q659A1 982 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 HIBCHQ6NVY1 386 aaPredicted RBP4.96□□□□□ -1.62
HTT-210ENST00000512909 MZT2AQ6P582 158 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 RNF207Q6ZRF8 634 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 SKAP1Q86WV1 359 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 EXOC8Q8IYI6 725 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ZNF527Q8NB42 609 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 TOR1AIP2Q8NFQ8 470 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 OR56A3Q8NH54 315 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 POC1BQ8TC44 478 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 BPIFB1Q8TDL5 484 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ATRIPQ8WXE1 791 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 LRRC59Q96AG4 307 aaKnown RBP4.96□□□□□ -1.62
HTT-210ENST00000512909 WWC2-AS2Q96NR7 200 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ARPC5LQ9BPX5 153 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 CHST8Q9H2A9 424 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 CYP4F11Q9HBI6 524 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ETAA1Q9NY74 926 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 GPRC5BQ9NZH0 403 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 DEPDC5O75140 1603 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 ADGRB3O60242 1522 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 SPATA31A3Q5VYP0 1347 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 TET3O43151 1660 aa4.96□□□□□ -1.62
HTT-210ENST00000512909 DHX57Q6P158 1386 aaKnown RBP4.95□□□□□ -1.62
HTT-210ENST00000512909 H7C4K7 107 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PSMD9O00233 223 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PODXLO00592 558 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 ADAMTS3O15072 1205 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 CCNT2O60583 730 aaKnown RBP4.95□□□□□ -1.62
HTT-210ENST00000512909 COQ9O75208 318 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 SUN1O94901 812 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PEX11BO96011 259 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 TSHRP16473 764 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 BMPR1AP36894 532 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PTDSS1P48651 473 aaKnown RBP4.95□□□□□ -1.62
HTT-210ENST00000512909 VAV2P52735 878 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 TUBA3CQ13748 450 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 TRIM14Q14142 442 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 ELF2Q15723 593 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 RGS7BPQ6MZT1 257 aaPredicted RBP4.95□□□□□ -1.62
HTT-210ENST00000512909 TUBA3EQ6PEY2 450 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 BRINP3Q76B58 766 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PPP1R32Q7Z5V6 425 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 MICU3Q86XE3 530 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PROKR1Q8TCW9 393 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 POF1BQ8WVV4 589 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 CCT6BQ92526 530 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 MAML1Q92585 1016 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 KIAA1191Q96A73 305 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 FAM136AQ96C01 138 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 MYEOVQ96EZ4 313 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 SNX27Q96L92 541 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 SIN3AQ96ST3 1273 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 NEU1Q99519 415 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 PAGR1Q9BTK6 254 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 TEX101Q9BY14 249 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 ACTRT3Q9BYD9 372 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 FAM83DQ9H4H8 585 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 ZNF768Q9H5H4 540 aaKnown RBP4.95□□□□□ -1.62
HTT-210ENST00000512909 TMOD4Q9NZQ9 345 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 MYO1AQ9UBC5 1043 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 CDC23Q9UJX2 597 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 USP22Q9UPT9 525 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 CHST2Q9Y4C5 530 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 ZFYVE9O95405 1425 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 E9PCH4 1651 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 UNC13BO14795 1591 aa4.95□□□□□ -1.62
HTT-210ENST00000512909 POLR1AO95602 1720 aaPredicted RBP4.94□□□□□ -1.62
HTT-210ENST00000512909 ABHD14A-ACY1A0A1B0GW23 586 aa4.94□□□□□ -1.62
HTT-210ENST00000512909 F8W8V4 182 aa4.94□□□□□ -1.62
HTT-210ENST00000512909 AREL1O15033 823 aa4.94□□□□□ -1.62
HTT-210ENST00000512909 PEX1O43933 1283 aa4.94□□□□□ -1.62
HTT-210ENST00000512909 SRGAP2O75044 1071 aa4.94□□□□□ -1.62
HTT-210ENST00000512909 SKAP2O75563 359 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms