RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 PPP1R32Q7Z5V6 425 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 SMC5Q8IY18 1101 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 RNF152Q8N8N0 203 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 OR6B3Q8NGW1 331 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 DDB2Q92466 427 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 DPH1Q9BZG8 443 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 MYH16Q9H6N6 1097 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 PLCB1Q9NQ66 1216 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 GJB4Q9NTQ9 266 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 SERTAD4Q9NUC0 356 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 XPR1Q9UBH6 696 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 OGDHLQ9ULD0 1010 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 MED16Q9Y2X0 877 aa3.87□□□□□ -1.79
CHD1-207ENST00000511628 WDR27A2RRH5 827 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 ISM1B1AKI9 464 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 TMEM233B4DJY2 109 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 TARM1B6A8C7 271 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 IFRD1O00458 451 aaPredicted RBP3.86□□□□□ -1.79
CHD1-207ENST00000511628 JTBO76095 146 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 FESP07332 822 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 CYP2C9P11712 490 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 ENGP17813 658 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 ABCB4P21439 1286 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
CHD1-207ENST00000511628 VIPR2P41587 438 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 STT3AP46977 705 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 TRAPPC10P48553 1259 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 UCP3P55916 312 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 TPTEP56180 551 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 RPS16P62249 146 aaKnown RBP3.86□□□□□ -1.79
CHD1-207ENST00000511628 TCF15Q12870 199 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 BOP1Q14137 746 aaKnown RBP3.86□□□□□ -1.79
CHD1-207ENST00000511628 MGAT5BQ3V5L5 792 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 TUBB8Q3ZCM7 444 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 FAM209BQ5JX69 171 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 GORABQ5T7V8 394 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 DEPDC1Q5TB30 811 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 ANKRD16Q6P6B7 361 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 WDR53Q7Z5U6 358 aaPredicted RBP3.86□□□□□ -1.79
CHD1-207ENST00000511628 DTX2Q86UW9 622 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 SLC15A3Q8IY34 581 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 SLC15A4Q8N697 577 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 KBTBD7Q8WVZ9 684 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 R3HDM4Q96D70 268 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 AS3MTQ9HBK9 375 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 ZNF287Q9HBT7 754 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 SACM1LQ9NTJ5 587 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 TRMT13Q9NUP7 481 aaKnown RBP3.86□□□□□ -1.79
CHD1-207ENST00000511628 CDC23Q9UJX2 597 aa3.86□□□□□ -1.79
CHD1-207ENST00000511628 A1L4Q6 167 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 BTN3A1O00481 513 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 DCLK1O15075 740 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 EIF3JO75822 258 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 DLDP09622 509 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 NPSP0C0P6 89 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 SETSIPP0DME0 302 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 TOB1P50616 345 aaPredicted RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 CHAF1AQ13111 956 aaPredicted RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 STK3Q13188 491 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 CTBP1Q13363 440 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 RAB32Q13637 225 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 PMS2P11Q13670 270 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 DAG1Q14118 895 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 TBC1D25Q3MII6 688 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 AARS2Q5JTZ9 985 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 HIBCHQ6NVY1 386 aaPredicted RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 C1orf228Q6PIY5 440 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 NAPRTQ6XQN6 538 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 PARS2Q7L3T8 475 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 MAVSQ7Z434 540 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 MICU3Q86XE3 530 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 SRRM1Q8IYB3 904 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 DNAJC5GQ8N7S2 189 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 DEPTORQ8TB45 409 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 OSCP1Q8WVF1 389 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 POF1BQ8WVV4 589 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 ATG4AQ8WYN0 398 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 SMG7Q92540 1137 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 TBC1D5Q92609 795 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 GLG1Q92896 1179 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 MSLNLQ96KJ4 702 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 MS4A7Q9GZW8 240 aaPredicted RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 NRIP3Q9NQ35 241 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 SERHLQ9NQF3 203 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 NDRG4Q9ULP0 352 aaKnown RBP3.85□□□□□ -1.79
CHD1-207ENST00000511628 SH2B3Q9UQQ2 575 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 PCDHGB2Q9Y5G2 931 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 TNFRSF18Q9Y5U5 241 aa3.85□□□□□ -1.79
CHD1-207ENST00000511628 TRIM43BA6NCK2 446 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 hCG_1984214I3L0E3 225 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 PSMD9O00233 223 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 IL18RAPO95256 599 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 IL6RP08887 468 aaPredicted RBP3.84□□□□□ -1.79
CHD1-207ENST00000511628 PARP1P09874 1014 aaKnown RBP3.84□□□□□ -1.79
CHD1-207ENST00000511628 HARSP12081 509 aaKnown RBP3.84□□□□□ -1.79
CHD1-207ENST00000511628 IL1R1P14778 569 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 LIPAP38571 399 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 SLC11A2P49281 568 aa3.84□□□□□ -1.79
CHD1-207ENST00000511628 PDE6CP51160 858 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms