RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 AGFG1P52594 562 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 NHLH2Q02577 135 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 SREBF2Q12772 1141 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 BEAN1Q3B7T3 259 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 FLYWCH1Q4VC44 716 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 TMEM31Q5JXX7 168 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 METRNLQ641Q3 311 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 CHST15Q7LFX5 561 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 FAM90A1Q86YD7 464 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 OR10H5Q8NGA6 315 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 PLBD2Q8NHP8 589 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 RAPGEF4Q8WZA2 1011 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 SLC9A6Q92581 669 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 CAVIN3Q969G5 261 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 LTV1Q96GA3 475 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 GDF15Q99988 308 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 TMEM60Q9H2L4 133 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 GSTO2Q9H4Y5 243 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 WDCPQ9H6R7 721 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 LMBRD1Q9NUN5 540 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 PNPOQ9NVS9 261 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 BAHCC1Q9P281 2608 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 ASAP1Q9ULH1 1129 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 ARFGEF2Q9Y6D5 1785 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 TTC21BQ7Z4L5 1316 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 MUC6Q6W4X9 2439 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 ITGB4P16144 1822 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 AFDNP55196 1824 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 A6NNZ2 444 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 FAM227AF5H4B4 570 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 H3BUI4 141 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 LEFTY2O00292 366 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 KIAA0355O15063 1070 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 LPXNO60711 386 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 SLC43A1O75387 559 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 NDUFA10O95299 355 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 FOSL2P15408 326 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 CHN2P52757 468 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 C21orf58P58505 322 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 RNASE9P60153 205 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 RAB1AP62820 205 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 FAM189BP81408 668 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 HLTFQ14527 1009 aaKnown RBP eCLIP4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 PLS1Q14651 629 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 GRM3Q14832 879 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 ANO6Q4KMQ2 910 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 CCDC157Q569K6 752 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 ABHD17BQ5VST6 288 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 NPNTQ6UXI9 565 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 NOL8Q76FK4 1167 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 KIAA0319LQ8IZA0 1049 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 SLC35A4Q96G79 324 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 CCDC136Q96JN2 1154 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 BBC3Q96PG8 261 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 CDX2Q99626 313 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 BRIP1Q9BX63 1249 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 B3GNT5Q9BYG0 378 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 SYNPO2LQ9H987 977 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 SYBUQ9NX95 663 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 ANKFY1Q9P2R3 1169 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 DKK2Q9UBU2 259 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 FEZ2Q9UHY8 353 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 INSL6Q9Y581 213 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 CDHR2Q9BYE9 1310 aa4.41□□□□□ -1.7
TOPBP1-208ENST00000511439 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.7
TOPBP1-208ENST00000511439 PIPSLA2A3N6 862 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 PRC1O43663 620 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 HAUS5O94927 633 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 HRGP04196 525 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 SLC6A2P23975 617 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 DDX6P26196 483 aaKnown RBP eCLIP4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 GNALP38405 381 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 TM4SF4P48230 202 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 PTTG1IPP53801 180 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 TBX4P57082 545 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 NHLH1Q02575 133 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 GALEQ14376 348 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 FAM102AQ5T9C2 384 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 MED25Q71SY5 747 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 SRGAP1Q7Z6B7 1085 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 UBE2Q1Q7Z7E8 422 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 DAAM2Q86T65 1068 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 PPP1R3BQ86XI6 285 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 SH2D3CQ8N5H7 860 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 CPEB3Q8NE35 698 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 LINC00476Q8WZB0 136 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 NEU1Q99519 415 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 MRPL46Q9H2W6 279 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 FAM204AQ9H8W3 233 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 GNL3LQ9NVN8 582 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 JKAMPQ9P055 326 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 L1RE1Q9UN81 338 aa4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 FRMPD2Q68DX3 1309 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-208ENST00000511439 CDHR4A6H8M9 788 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 PRSS29PA6NIE9 313 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 TPP1O14773 563 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 PRSS23O95084 383 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms