RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 PCED1BQ96HM7 432 aa21.4■■□□□ 1.02
TRIO-215ENST00000510281 FUBP3Q96I24 572 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRIO-215ENST00000510281 LRRC3BQ96PB8 259 aa21.4■■□□□ 1.02
TRIO-215ENST00000510281 GSDMAQ96QA5 445 aa21.4■■□□□ 1.02
TRIO-215ENST00000510281 C2orf42Q9NWW7 574 aa21.4■■□□□ 1.02
TRIO-215ENST00000510281 TRIM49BA6NDI0 452 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 MAPK13O15264 365 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 TADA3O75528 432 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 SMC2O95347 1197 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 PRAMEF12O95522 483 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 BDNFP23560 247 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 RPL13P26373 211 aaKnown RBP21.39■■□□□ 1.01
TRIO-215ENST00000510281 CDC25CP30307 473 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 PIK3CAP42336 1068 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 GCLMP48507 274 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 PPP3CAQ08209 521 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 EDRF1Q3B7T1 1238 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 ZNF667Q5HYK9 610 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 ISM2Q6H9L7 571 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 C4orf50Q6ZRC1 276 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 INTS8Q75QN2 995 aaKnown RBP21.39■■□□□ 1.01
TRIO-215ENST00000510281 WDR5BQ86VZ2 330 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 FAM160A2Q8N612 972 aaPredicted RBP21.39■■□□□ 1.01
TRIO-215ENST00000510281 GCNAQ96QF7 691 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 SMG9Q9H0W8 520 aaKnown RBP21.39■■□□□ 1.01
TRIO-215ENST00000510281 MAN1B1Q9UKM7 699 aa21.39■■□□□ 1.01
TRIO-215ENST00000510281 A8MXQ7 604 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 GDF9O60383 454 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 NOL4O94818 638 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 FGF19O95750 216 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 HLA-DRAP01903 254 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 CSH1P0DML2 217 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 CSH2P0DML3 217 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 PSMC2P35998 433 aaKnown RBP21.38■■□□□ 1.01
TRIO-215ENST00000510281 LIMK1P53667 647 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 NLRP12P59046 1061 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 RPL10AP62906 217 aaKnown RBP21.38■■□□□ 1.01
TRIO-215ENST00000510281 ARHGAP15Q53QZ3 475 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 MYCBPAPQ8TBZ2 947 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 GTSE1Q9NYZ3 720 aa21.38■■□□□ 1.01
TRIO-215ENST00000510281 MAGEC2Q9UBF1 373 aaPredicted RBP21.38■■□□□ 1.01
TRIO-215ENST00000510281 IKBKBO14920 756 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 F11P03951 625 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 KRT13P13646 458 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 MAGEA11P43364 429 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 ZNF165P49910 485 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 CACNA2D1P54289 1103 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 PLCB2Q00722 1185 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 ORC1Q13415 861 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 COBLL1Q53SF7 1204 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 HEATR6Q6AI08 1181 aaKnown RBP21.37■■□□□ 1.01
TRIO-215ENST00000510281 TAS1R2Q8TE23 839 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 TRIM44Q96DX7 344 aaPredicted RBP21.37■■□□□ 1.01
TRIO-215ENST00000510281 PDLIM2Q96JY6 352 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 ZNF518BQ9C0D4 1074 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 TASP1Q9H6P5 420 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 HMGXB4Q9UGU5 601 aa21.37■■□□□ 1.01
TRIO-215ENST00000510281 CLDN5O00501 218 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 ASS1P00966 412 aaKnown RBP21.36■■□□□ 1.01
TRIO-215ENST00000510281 PTPN1P18031 435 aaKnown RBP21.36■■□□□ 1.01
TRIO-215ENST00000510281 ASPAP45381 313 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 PON2Q15165 354 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 MAPRE1Q15691 268 aaKnown RBP21.36■■□□□ 1.01
TRIO-215ENST00000510281 ANKRD40Q6AI12 368 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 CEP68Q76N32 757 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 B3GALNT2Q8NCR0 500 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 LOXL4Q96JB6 756 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 ZFYVE19Q96K21 471 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 SLC46A2Q9BY10 475 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 APOBEC3GQ9HC16 384 aaKnown RBP21.36■■□□□ 1.01
TRIO-215ENST00000510281 TMEM30AQ9NV96 361 aa21.36■■□□□ 1.01
TRIO-215ENST00000510281 CHD6Q8TD26 2715 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 CNOT1A5YKK6 2376 aaKnown RBP21.35■■□□□ 1.01
TRIO-215ENST00000510281 CCDC163A0A0D9SF12 145 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 DPYSL4O14531 572 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 CETN3O15182 167 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 FAM163BP0C2L3 166 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 CD44P16070 742 aaKnown RBP21.35■■□□□ 1.01
TRIO-215ENST00000510281 GRIK1P39086 918 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 SGSM1Q2NKQ1 1148 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 TXNDC8Q6A555 127 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 MAB21L3Q8N8X9 362 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 BPIFA3Q9BQP9 254 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 CBX8Q9HC52 389 aa21.35■■□□□ 1.01
TRIO-215ENST00000510281 F8VP50 259 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 TM4SF5O14894 197 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 EPB41P11171 864 aaKnown RBP21.34■■□□□ 1.01
TRIO-215ENST00000510281 BMP6P22004 513 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 HOXC13P31276 330 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 USP46P62068 366 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 NOP14P78316 857 aaKnown RBP21.34■■□□□ 1.01
TRIO-215ENST00000510281 VSTM1Q6UX27 236 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 ZC3H3Q8IXZ2 948 aaKnown RBP21.34■■□□□ 1.01
TRIO-215ENST00000510281 TTC8Q8TAM2 541 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 BPIFB1Q8TDL5 484 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 TRMT2BQ96GJ1 504 aaKnown RBP21.34■■□□□ 1.01
TRIO-215ENST00000510281 MYRFLQ96LU7 910 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 TSG101Q99816 390 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 B3GNT5Q9BYG0 378 aa21.34■■□□□ 1.01
TRIO-215ENST00000510281 TMEM8AQ9HCN3 771 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms