RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 IRF2BP2Q7Z5L9 587 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZNF354CQ86Y25 554 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 CPXCR1Q8N123 301 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 MAGEB6Q8N7X4 407 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TEX19Q8NA77 164 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ACRBPQ8NEB7 543 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 FAM46DQ8NEK8 389 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 RP9Q8TA86 221 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 CYP2W1Q8TAV3 490 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ATG4AQ8WYN0 398 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TNPO1Q92973 898 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TRIM63Q969Q1 353 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 RUNDC1Q96C34 613 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 MARK4Q96L34 752 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 C5orf34Q96MH7 638 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SLC46A1Q96NT5 459 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SMAD5Q99717 465 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ARPC5LQ9BPX5 153 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 VPS33BQ9H267 617 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TRNAU1APQ9NX07 287 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZNF69Q9UC07 566 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ABCF2Q9UG63 623 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SERTAD3Q9UJW9 196 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 FBXO9Q9UK97 447 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 MRFAP1Q9Y605 127 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TNKSO95271 1327 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ANO9A1A5B4 782 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 TBX3O15119 743 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 KATNA1O75449 491 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 FGAP02671 866 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 AHSGP02765 367 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 GNAI2P04899 355 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 TRIM27P14373 513 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 TYRP14679 529 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 PDCP20941 246 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 GTF2H3Q13889 308 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 ALFQ53S48 1182 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 EFCAB2Q5VUJ9 269 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 FCRL6Q6DN72 434 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 KIRREL2Q6UWL6 708 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 CLEC4GQ6UXB4 293 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 Q6ZWC4 215 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 USP43Q70EL4 1123 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 PARS2Q7L3T8 475 aaKnown RBP2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 HEATR3Q7Z4Q2 680 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 C14orf80Q86SX3 495 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 NME8Q8N427 588 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 CPA6Q8N4T0 437 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 NANOGP1Q8N7R0 232 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 RBMXL3Q8N7X1 1067 aaKnown RBP2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 PNLDC1Q8NA58 520 aaKnown RBP2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 GLG1Q92896 1179 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 HOOK2Q96ED9 719 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 TNIP3Q96KP6 325 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 SCLT1Q96NL6 688 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 PTDSS2Q9BVG9 487 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 SELENOOQ9BVL4 669 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 TMX4Q9H1E5 349 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 FEZ2Q9UHY8 353 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 PNMA8BQ9ULN7 279 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 GABRQQ9UN88 632 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 GTF2A1LQ9UNN4 478 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 SCINQ9Y6U3 715 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 WDR17Q8IZU2 1322 aa2.88□□□□□ -1.95
DEPDC1B-204ENST00000509006 A1L4Q6 167 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ERVV-2B6SEH9 535 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 POC1B-GALNT4F8VUJ3 575 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 NPSP0C0P6 89 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ATXN1LP0C7T5 689 aaKnown RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ATP5F1P24539 256 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 HTR3AP46098 478 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 PXNP49023 591 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 MAP2K6P52564 334 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 LILRA4P59901 499 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 EXOSC9Q06265 439 aaKnown RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 SAFBQ15424 915 aaKnown RBP eCLIP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 TMEM95Q3KNT9 176 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 THEMIS2Q5TEJ8 643 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ARHGAP40Q5TG30 622 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 CCDC174Q6PII3 467 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 TMTC2Q8N394 836 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 GALNT4Q8N4A0 578 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 LRRC71Q8N4P6 559 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 GPATCH11Q8N954 259 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 MYRIPQ8NFW9 859 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 PIGOQ8TEQ8 1089 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 NSMCE1Q8WV22 266 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 JPH3Q8WXH2 748 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 SOCS4Q8WXH5 440 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 COQ8BQ96D53 544 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 LENG8Q96PV6 779 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 SNX18Q96RF0 628 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ELAC2Q9BQ52 826 aaKnown RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 HERPUD2Q9BSE4 406 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 SARGQ9BW04 601 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 TTYH3Q9C0H2 523 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZNF112Q9UJU3 913 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 NDRG4Q9ULP0 352 aaKnown RBP2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 ANKRD6Q9Y2G4 727 aa2.87□□□□□ -1.95
DEPDC1B-204ENST00000509006 TCRBV5S1A1TA0A578 114 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms